Hi,
I was trying to do a UTest for the
org.apache.ctakes.coreference.data.PrintMimicMarkables (recently added),
but I couldn't find any of the existing resources that can be used for
this. Can anyone help me pointing to a resource (Lucene index) folder.
org.apache.ctakes.coreference.data.PrintMimicMarkables \
/home/alex/projects/apache/ctakes/ctakes-dictionary-lookup-res/target/classes/org/apache/ctakes/dictionary/lookup/rxnorm_index
\
index.out
I was trying with the following lucene folder/resource:
./ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k
And also the dictionaries:
./ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/snomed-like_codes_sample
./ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/assertion_cue_phrase_index
./ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/OrangeBook
./ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/snomed-like_sample
./ctakes-dictionary-lookup-res/src/main/resources/org/apache/ctakes/dictionary/lookup/drug_index
Any execution looks like:
01 Oct 2017 19:50:19 INFO ConstituencyParser - Initializing parser...
Oct 01, 2017 7:50:20 PM
org.apache.uima.collection.impl.cpm.engine.ArtifactProducer process
WARNING: Got Exception. (Thread Name: [CollectionReader Thread]::) Message:
docID must be >= 0 and < maxDoc=5000 (got docID=5000)
Oct 01, 2017 7:50:20 PM
org.apache.uima.collection.impl.cpm.engine.ArtifactProducer run(820)
WARNING: docID must be >= 0 and < maxDoc=5000 (got docID=5000)
java.lang.IllegalArgumentException: docID must be >= 0 and < maxDoc=5000
(got docID=5000)
at
org.apache.lucene.index.BaseCompositeReader.readerIndex(BaseCompositeReader.java:152)
at
org.apache.lucene.index.BaseCompositeReader.document(BaseCompositeReader.java:115)
at org.apache.lucene.index.IndexReader.document(IndexReader.java:436)
at
org.apache.ctakes.core.cr.LuceneCollectionReader.getNext(LuceneCollectionReader.java:90)
at
org.apache.uima.collection.impl.cpm.engine.ArtifactProducer.readNext(ArtifactProducer.java:494)
at
org.apache.uima.collection.impl.cpm.engine.ArtifactProducer.run(ArtifactProducer.java:711)
Collection process complete called, closing file writer.
I appreciate any of your help,
Alex
