Dear all, I'm using cTAKES default clinical pipeline with the following dictionary to extract the following:
- Signs and symptoms (Human Phenotype Ontology) - Disorders and disease (ICD 10 CM) - Medications (RxNorms) Given the processing time of the annotation steps, it would be best if I don't have to run cTAKES clinical pipeline three times for each of the dictionaries. What would be your recommendation? Does merging all of the dictionaries make sense? If not, is there a way to run the fast dictionary lookup three times (for each dictionary) in the same pipeline and collect CUIs? Thanks, Masoud
