Seconded, thanks a lot Sean and Peter for getting this working and turned around so quickly! Tim
On Wed, 2021-01-20 at 23:13 +0100, Peter Abramowitsch wrote: > * External Email - Caution * > > > Thanks Sean! > > Peter > > On Wed, Jan 20, 2021 at 4:25 PM Finan, Sean < > sean.fi...@childrens.harvard.edu> wrote: > > > ???As some have experienced, the U.S.A. National Library of > > Medicine (NLM) > > has changed the authentication method for using the Unified Medical > > Language System (UMLS). > > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__www.nlm.nih.gov_research_umls_index.html&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=KoUGdRx91vEVMVc0CokYc1Uhsfa38K34Dhhd8GDDdhA&s=CVA7xXHEy4dOSNfEju1Or1cr6KZd3QY7bnY4yIDye3I&e= > > > > > > > > Though a bit late in its arrival, Apache cTAKES now has a patch > > release > > that supports the new UMLS authentication method. > > > > > > The release number is 4.0.0.1, an update of the previous release > > version > > 4.0.0 with a single change to enable the new UMLS authentication. > > > > No other code or functionality has been modified and there are no > > enhancements to the previous release 4.0.0 > > > > > > There are instructions for use on the Apache cTAKES wiki. > > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__cwiki.apache.org_confluence_display_CTAKES_cTAKES-2B4.0.0.1&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=KoUGdRx91vEVMVc0CokYc1Uhsfa38K34Dhhd8GDDdhA&s=5Fxduqd71TO5P2AWuZyzAYmaBG1BiOM7G3mWXN-ljqo&e= > > > > > > > > The source code is available in the 4.0.0.1 tag Subversion (svn) > > repository. > > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__svn.apache.org_repos_asf_ctakes_tags_ctakes-2D4.0.0.1_&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=KoUGdRx91vEVMVc0CokYc1Uhsfa38K34Dhhd8GDDdhA&s=1jNLJHU_4gH08DUNZDjfC4BLGsPSKdiOe63D48Qqekw&e= > > > > > > > > The jar and pom files are available from maven central and any > > Applications utilizing Apache cTAKES as an Apache Maven dependency > > should > > update their pom files. > > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__search.maven.org_search-3Fq-3Dctakes&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=KoUGdRx91vEVMVc0CokYc1Uhsfa38K34Dhhd8GDDdhA&s=7ICwdr1JlzQeT2skY6TMXmU_u3WAZlxTYKpIZGmGQfs&e= > > > > > > > > At this time the Apache infra script that points mirror download > > servers > > to the pre-built zip/archive files has not run. I hope that the > > mirror > > servers are updated in a day or two. > > > > When the mirror servers are updated the buttons on the "Downloads" > > page of > > ctakes.apache.org should trigger a download of the patch > > version. Until > > then you will get a "page not found" error. > > > > Until the pre-built archive downloads are available through the > > website, > > you can find them in the release repository. > > > > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__repository.apache.org_content_repositories_releases_org_apache_ctakes_ctakes-2Dcore_4.0.0.1_&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=KoUGdRx91vEVMVc0CokYc1Uhsfa38K34Dhhd8GDDdhA&s=uM_5s0vlGN8eJc1nK4s9RPxNQ2o5KB3vWRC1M0qo2HU&e= > > > > > > > > For more information please visit the wiki page on the Apache > > cTAKES > > 4.0.0.1 patch release. > > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__cwiki.apache.org_confluence_display_CTAKES_cTAKES-2B4.0.0.1&d=DwIBaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=KoUGdRx91vEVMVc0CokYc1Uhsfa38K34Dhhd8GDDdhA&s=5Fxduqd71TO5P2AWuZyzAYmaBG1BiOM7G3mWXN-ljqo&e= > > > > > > > > > > A very special thanks goes to Peter Abramowitsch for conception and > > original implementation of the authentication code and workflow. > > > > > > Many thanks to those who boldly tested, documented and otherwise > > made this > > patch and its trunk equivalent possible, including > > > > Kean Kaufmann > > > > Gandhi Rajan > > > > Eugenia Monogyiou > > > > Timothy Miller > > > > and anybody else that I have forgotten (apologies). > > > > > > ?And for those of you gave gave me a bit of prodding to get this > > wrapped > > up and published ... in the end I am grateful and you have done us > > all a > > service. > > > > > > Cheers, > > > > Sean > > > >
