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https://issues.apache.org/jira/browse/DIRSERVER-1118?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
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Alex Karasulu closed DIRSERVER-1118.
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    Resolution: Fixed

Looks like this was fixed apparently.  I've confirmed this using a test case 
which sets up a DirectoryService with both a dc=foo,dc=com and a dc=bar,dc=com 
partition using the dc=com common base.  The tests pass.  Here are the commits:

Trunk => http://svn.apache.org/viewvc?view=rev&revision=674662
BigBang => http://svn.apache.org/viewvc?view=rev&revision=674663

There's also the chance that the server configuration or (rather than core) and 
xbean is failing if the user was configuring the server with a server.xml file. 
 I made sure with these tests that the partitions are published via 
namingContexts attribute in the RootDSE as well as being available and online 
for operations whether they come from internal operations against the DS or 
from the wire.

> Cannot have two partitions dc=example,dc=com and dc=carrefour,dc=com at the 
> same time.
> --------------------------------------------------------------------------------------
>
>                 Key: DIRSERVER-1118
>                 URL: https://issues.apache.org/jira/browse/DIRSERVER-1118
>             Project: Directory ApacheDS
>          Issue Type: Bug
>    Affects Versions: 1.5.1
>         Environment: Windows XP, Java 1.5
>            Reporter: Daniel Sportes
>            Assignee: Alex Karasulu
>            Priority: Critical
>             Fix For: 1.5.3
>
>
> I duplicate the partition dc=example,dc=com intoa partition 
> dc=carrefour,dc=com (my company).
> However the startup is OK with example, is OK with carrefour and not with 
> both.
> A lot of companies have an id ending with dc=com and not being able to have 
> one partition by company is an issue.
> I do not exclude a mistake in my configuration.

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