Khurram Faraaz created DRILL-3043:
-------------------------------------
Summary: Select over corrupt parquet file must return a better
message
Key: DRILL-3043
URL: https://issues.apache.org/jira/browse/DRILL-3043
Project: Apache Drill
Issue Type: Bug
Components: Storage - Parquet
Affects Versions: 1.0.0
Environment: 21cc578b6b8c8f3ca1ebffd3dbb92e35d68bc726 | MD-272: MapRDB
plugin needs another update on 2015-05-08
Reporter: Khurram Faraaz
Assignee: Steven Phillips
Priority: Minor
Select over a corrupt parquet file does not return proper error message to
user. Looks like the correct message is getting lost.
The below CTAS was used to create the original parquet file.
{code}
0: jdbc:drill:schema=dfs.tmp> create table tblJsnToPrq_01 as select key from
`oneMlnDblData.json`;
+------------+---------------------------+
| Fragment | Number of records written |
+------------+---------------------------+
| 0_0 | 999999 |
+------------+---------------------------+
1 row selected (2.381 seconds)
0: jdbc:drill:schema=dfs.tmp> select count(key) from tblJsnToPrq_01;
+------------+
| EXPR$0 |
+------------+
| 999999 |
+------------+
1 row selected (0.232 seconds)
{code}
{code}
0: jdbc:drill:schema=dfs.tmp> select key from `corrupt_Parquet.parquet`;
Error: SYSTEM ERROR: java.io.IOException: FAILED_TO_UNCOMPRESS(5)
Fragment 0:0
[Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
(state=,code=0)
{code}
The way the corrupt parquet file was created from the original parquet file.
The first and last 1000000 bytes were written to the new (corrupt) parquet file
{code}
[root@centos-01 mal_formed_parquet]# head -c 1000000 0_0_0.parquet >>
corrupt_Parquet.parquet
[root@centos-01 mal_formed_parquet]# tail -c 1000000 0_0_0.parquet >>
corrupt_Parquet.parquet
{code}
Stack trace from drillbit.log
{code}
2015-05-12 23:05:45,285 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] ERROR
o.a.d.c.e.DrillRuntimeException - SYSTEM ERROR: java.io.IOException:
FAILED_TO_UNCOMPRESS(5)
Fragment 0:0
[Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
org.apache.drill.common.exceptions.UserException: SYSTEM ERROR:
java.io.IOException: FAILED_TO_UNCOMPRESS(5)
Fragment 0:0
[Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
at
org.apache.drill.common.exceptions.UserException$Builder.build(UserException.java:495)
~[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:286)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:254)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[na:1.7.0_45]
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_45]
at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
Caused by: org.apache.drill.common.exceptions.DrillRuntimeException: Error in
parquet record reader.
Message:
Hadoop path: /tmp/corrupt_Parquet.parquet
Total records read: 0
Mock records read: 0
Records to read: 32768
Row group index: 0
Records in row group: 999999
Parquet Metadata: ParquetMetaData{FileMetaData{schema: message root {
optional double key;
}
, metadata: {}}, blocks: [BlockMetaData{999999, 8000439 [ColumnMetaData{SNAPPY
[key] DOUBLE [PLAIN, BIT_PACKED, RLE], 4}]}]}
at
org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.handleAndRaise(ParquetRecordReader.java:339)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.next(ParquetRecordReader.java:441)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.physical.impl.ScanBatch.next(ScanBatch.java:175)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.physical.impl.validate.IteratorValidatorBatchIterator.next(IteratorValidatorBatchIterator.java:118)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:83)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.physical.impl.ScreenCreator$ScreenRoot.innerNext(ScreenCreator.java:80)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:73)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor$1.run(FragmentExecutor.java:223)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor$1.run(FragmentExecutor.java:217)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at java.security.AccessController.doPrivileged(Native Method)
~[na:1.7.0_45]
at javax.security.auth.Subject.doAs(Subject.java:415) ~[na:1.7.0_45]
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1469)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:217)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
... 4 common frames omitted
Caused by: java.io.IOException: FAILED_TO_UNCOMPRESS(5)
at org.xerial.snappy.SnappyNative.throw_error(SnappyNative.java:78)
~[na:na]
at org.xerial.snappy.SnappyNative.rawUncompress(Native Method) ~[na:na]
at org.xerial.snappy.Snappy.uncompress(Snappy.java:467)
~[snappy-java-1.0.5-M3.jar:na]
at
parquet.hadoop.codec.SnappyDecompressor$SnappyDirectDecompressor.decompress(SnappyDecompressor.java:163)
~[parquet-hadoop-1.6.0rc3-drill-r0.3.jar:1.6.0rc3-drill-r0.3]
at
org.apache.drill.exec.store.parquet.DirectCodecFactory$FullDirectDecompressor.decompress(DirectCodecFactory.java:239)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.store.parquet.columnreaders.PageReader.next(PageReader.java:230)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.store.parquet.columnreaders.NullableColumnReader.processPages(NullableColumnReader.java:76)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.readAllFixedFields(ParquetRecordReader.java:380)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.next(ParquetRecordReader.java:423)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
... 15 common frames omitted
2015-05-12 23:05:45,287 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] INFO
o.a.drill.exec.work.foreman.Foreman - State change requested. RUNNING -->
FAILED
org.apache.drill.common.exceptions.UserRemoteException: SYSTEM ERROR:
java.io.IOException: FAILED_TO_UNCOMPRESS(5)
Fragment 0:0
[Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
at
org.apache.drill.exec.work.foreman.QueryManager$1.statusUpdate(QueryManager.java:460)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.QueryManager$RootStatusReporter.statusChange(QueryManager.java:440)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:90)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:86)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:290)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:254)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[na:1.7.0_45]
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_45]
at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
2015-05-12 23:05:45,298 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] INFO
o.a.d.e.w.fragment.FragmentExecutor - 2aad78b6-09c6-0e17-accf-ab279fab39dc:0:0:
State change requested from FAILED --> CANCELLATION_REQUESTED for
2015-05-12 23:05:45,298 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] WARN
o.a.d.e.w.fragment.FragmentExecutor - Ignoring unexpected state transition
FAILED => CANCELLATION_REQUESTED.
2015-05-12 23:05:45,298 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] INFO
o.a.drill.exec.work.foreman.Foreman - foreman cleaning up.
2015-05-12 23:05:45,305 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] ERROR
o.a.d.exec.work.foreman.QueryManager - Failure while storing Query Profile
java.lang.RuntimeException: java.io.IOException: java.lang.InterruptedException
at
org.apache.drill.exec.store.sys.local.FilePStore.put(FilePStore.java:148)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.QueryManager.writeFinalProfile(QueryManager.java:286)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman$ForemanResult.close(Foreman.java:731)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman$StateSwitch.processEvent(Foreman.java:826)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman$StateSwitch.processEvent(Foreman.java:768)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.common.EventProcessor.sendEvent(EventProcessor.java:73)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman$StateSwitch.moveToState(Foreman.java:770)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman.moveToState(Foreman.java:871)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman.access$2700(Foreman.java:107)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.Foreman$StateListener.moveToState(Foreman.java:1132)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.QueryManager$1.statusUpdate(QueryManager.java:460)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.foreman.QueryManager$RootStatusReporter.statusChange(QueryManager.java:440)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:90)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:86)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:290)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:254)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[na:1.7.0_45]
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_45]
at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
Caused by: java.io.IOException: java.lang.InterruptedException
at org.apache.hadoop.util.Shell.runCommand(Shell.java:508)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.util.Shell.run(Shell.java:418)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:650)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.util.Shell.execCommand(Shell.java:739)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.util.Shell.execCommand(Shell.java:722)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.hadoop.fs.RawLocalFileSystem.setPermission(RawLocalFileSystem.java:676)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.hadoop.fs.FilterFileSystem.setPermission(FilterFileSystem.java:467)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.hadoop.fs.ChecksumFileSystem.create(ChecksumFileSystem.java:456)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.hadoop.fs.ChecksumFileSystem.create(ChecksumFileSystem.java:424)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:942)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:923)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:820)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:809)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
at
org.apache.drill.exec.store.dfs.DrillFileSystem.create(DrillFileSystem.java:175)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
at
org.apache.drill.exec.store.sys.local.FilePStore.put(FilePStore.java:145)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
... 19 common frames omitted
{code}
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