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https://issues.apache.org/jira/browse/GERONIMODEVTOOLS-534?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12648478#action_12648478
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Ted Kirby commented on GERONIMODEVTOOLS-534:
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When you remove the project from the server runtime, that should cause an 
undeploy command to be run on the server.  It is that undeploy command that is 
generating the error message from Geronimo.  G is having problems removing 
files.  See GERONIMO-3489, for example.  There should be other messages in the 
log indicating what file(s) are not being deleted.  There is re-try logic in 
the code.  It seems unlikely this is a GEP problem.

> Fail to remove directory from repository after removing project from elicpse
> ----------------------------------------------------------------------------
>
>                 Key: GERONIMODEVTOOLS-534
>                 URL: 
> https://issues.apache.org/jira/browse/GERONIMODEVTOOLS-534
>             Project: Geronimo-Devtools
>          Issue Type: Bug
>          Components: eclipse-plugin
>    Affects Versions: 2.1.3
>         Environment: OS:windows 2003
>            Reporter: viola.lu
>            Assignee: Tim McConnell
>            Priority: Minor
>         Attachments: testejb.jar
>
>
> Steps:
> 1.Create an ejb project in elicpse, and deploy it to geronimo server via WEP, 
> some errors output in console
> 2.So i remove it from current server runtime.Do some modifcation, and 
> redeploy it
> 3.But it tells me that 
> 11:39:19,546 ERROR [RepositoryConfigurationStore] 
> C:\geronimo-tomcat6-javaee5-2.1.3\repository\default\test\1.0\test-1.0.car is 
> not an empty directory
> 11:42:13,765 ERROR [RepositoryConfigurationStore] 
> C:\geronimo-tomcat6-javaee5-2.1.3\repository\default\test\1.0\test-1.0.car is 
> not an empty directory
> 4.I should go to repository to remove default directory first and go on.

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