Hello everyone,
Software stack is *nutch-branch-2.3.1, gora-hbase 0.6.1 Hadoop 2.5.2,
hbase-0.98.8-hadoop2
* I have added a set of seeds to crawl using this command
*
./bin/crawl /largeSeeds 1 http://localhost:8983/solr/ddcd 4*
For first iteration all of the commands(*inject, **generate, **fetch,
**parse, **update-table, **Indexer & delete duplicates.*) got executed
successfully.
For second iteration, *"CrawlDB update" *command got failed (please see
error log for reference), because of failure of this command the whole
process gets terminated.
****************************************************LOG
START************************************************************************************************
16/01/20 02:45:19 INFO parse.ParserJob: ParserJob: finished at
2016-01-20 02:45:19, time elapsed: 00:06:57
CrawlDB update for 1
/usr/share/searchEngine/nutch-branch-2.3.1/runtime/deploy/bin/nutch
updatedb -D mapred.reduce.tasks=2 -D mapred.child.java.opts=-Xmx1000m -D
mapred.reduce.tasks.speculative.execution=false -D
mapred.map.tasks.speculative.execution=false -D
mapred.compress.map.output=true 1453230757-13191 -crawlId 1
16/01/20 02:45:27 INFO crawl.DbUpdaterJob: DbUpdaterJob: starting at
2016-01-20 02:45:27
16/01/20 02:45:27 INFO crawl.DbUpdaterJob: DbUpdaterJob: batchId:
1453230757-13191
16/01/20 02:45:27 INFO plugin.PluginRepository: Plugins: looking in:
/tmp/hadoop-root/hadoop-unjar5654418190157422003/classes/plugins
16/01/20 02:45:28 INFO plugin.PluginRepository: Plugin Auto-activation
mode: [true]
16/01/20 02:45:28 INFO plugin.PluginRepository: Registered Plugins:
16/01/20 02:45:28 INFO plugin.PluginRepository: HTTP Framework
(lib-http)
16/01/20 02:45:28 INFO plugin.PluginRepository: Html Parse Plug-in
(parse-html)
16/01/20 02:45:28 INFO plugin.PluginRepository: MetaTags
(parse-metatags)
16/01/20 02:45:28 INFO plugin.PluginRepository: the nutch core
extension points (nutch-extensionpoints)
16/01/20 02:45:28 INFO plugin.PluginRepository: Basic Indexing
Filter (index-basic)
16/01/20 02:45:28 INFO plugin.PluginRepository: XML Libraries (lib-xml)
16/01/20 02:45:28 INFO plugin.PluginRepository: Anchor Indexing
Filter (index-anchor)
16/01/20 02:45:28 INFO plugin.PluginRepository: Basic URL Normalizer
(urlnormalizer-basic)
16/01/20 02:45:28 INFO plugin.PluginRepository: Language
Identification Parser/Filter (language-identifier)
16/01/20 02:45:28 INFO plugin.PluginRepository: Metadata Indexing
Filter (index-metadata)
16/01/20 02:45:28 INFO plugin.PluginRepository: CyberNeko HTML
Parser (lib-nekohtml)
16/01/20 02:45:28 INFO plugin.PluginRepository: Subcollection
indexing and query filter (subcollection)
16/01/20 02:45:28 INFO plugin.PluginRepository: SOLRIndexWriter
(indexer-solr)
16/01/20 02:45:28 INFO plugin.PluginRepository: Rel-Tag microformat
Parser/Indexer/Querier (microformats-reltag)
16/01/20 02:45:28 INFO plugin.PluginRepository: Http / Https
Protocol Plug-in (protocol-httpclient)
16/01/20 02:45:28 INFO plugin.PluginRepository: JavaScript Parser
(parse-js)
16/01/20 02:45:28 INFO plugin.PluginRepository: Tika Parser Plug-in
(parse-tika)
16/01/20 02:45:28 INFO plugin.PluginRepository: Top Level Domain
Plugin (tld)
16/01/20 02:45:28 INFO plugin.PluginRepository: Regex URL Filter
Framework (lib-regex-filter)
16/01/20 02:45:28 INFO plugin.PluginRepository: Regex URL Normalizer
(urlnormalizer-regex)
16/01/20 02:45:28 INFO plugin.PluginRepository: Link Analysis
Scoring Plug-in (scoring-link)
16/01/20 02:45:28 INFO plugin.PluginRepository: OPIC Scoring Plug-in
(scoring-opic)
16/01/20 02:45:28 INFO plugin.PluginRepository: More Indexing Filter
(index-more)
16/01/20 02:45:28 INFO plugin.PluginRepository: Http Protocol
Plug-in (protocol-http)
16/01/20 02:45:28 INFO plugin.PluginRepository: Creative Commons
Plugins (creativecommons)
16/01/20 02:45:28 INFO plugin.PluginRepository: Registered Extension-Points:
16/01/20 02:45:28 INFO plugin.PluginRepository: Parse Filter
(org.apache.nutch.parse.ParseFilter)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch Index Cleaning
Filter (org.apache.nutch.indexer.IndexCleaningFilter)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch Content Parser
(org.apache.nutch.parse.Parser)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch URL Filter
(org.apache.nutch.net.URLFilter)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch Scoring
(org.apache.nutch.scoring.ScoringFilter)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch URL Normalizer
(org.apache.nutch.net.URLNormalizer)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch Protocol
(org.apache.nutch.protocol.Protocol)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch Index Writer
(org.apache.nutch.indexer.IndexWriter)
16/01/20 02:45:28 INFO plugin.PluginRepository: Nutch Indexing
Filter (org.apache.nutch.indexer.IndexingFilter)
16/01/20 02:45:29 INFO Configuration.deprecation:
mapred.map.tasks.speculative.execution is deprecated. Instead, use
mapreduce.map.speculative
16/01/20 02:45:29 INFO Configuration.deprecation:
mapred.reduce.tasks.speculative.execution is deprecated. Instead, use
mapreduce.reduce.speculative
16/01/20 02:45:29 INFO Configuration.deprecation:
mapred.compress.map.output is deprecated. Instead, use
mapreduce.map.output.compress
16/01/20 02:45:29 INFO Configuration.deprecation: mapred.reduce.tasks is
deprecated. Instead, use mapreduce.job.reduces
16/01/20 02:45:29 INFO zookeeper.RecoverableZooKeeper: Process
identifier=hconnection-0x60a2630a connecting to ZooKeeper
ensemble=localhost:2181
16/01/20 02:45:29 INFO zookeeper.ZooKeeper: Client
environment:zookeeper.version=3.4.6-1569965, built on 02/20/2014 09:09 GMT
16/01/20 02:45:29 INFO zookeeper.ZooKeeper: Client
environment:host.name=cism479
16/01/20 02:45:29 INFO zookeeper.ZooKeeper: Client
environment:java.version=1.8.0_65
16/01/20 02:45:29 INFO zookeeper.ZooKeeper: Client
environment:java.vendor=Oracle Corporation
16/01/20 02:45:29 INFO zookeeper.ZooKeeper: Client
environment:java.home=/usr/lib/jvm/jdk1.8.0_65/jre
16/01/20 02:45:35 INFO zookeeper.ClientCnxn: EventThread shut down
16/01/20 02:45:35 INFO mapreduce.JobSubmitter: number of splits:2
16/01/20 02:45:36 INFO mapreduce.JobSubmitter: Submitting tokens for
job: job_1453210838763_0011
16/01/20 02:45:36 INFO impl.YarnClientImpl: Submitted application
application_1453210838763_0011
16/01/20 02:45:36 INFO mapreduce.Job: The url to track the job:
http://cism479:8088/proxy/application_1453210838763_0011/
16/01/20 02:45:36 INFO mapreduce.Job: Running job: job_1453210838763_0011
16/01/20 02:45:48 INFO mapreduce.Job: Job job_1453210838763_0011 running
in uber mode : false
16/01/20 02:45:48 INFO mapreduce.Job: map 0% reduce 0%
16/01/20 02:47:31 INFO mapreduce.Job: map 33% reduce 0%
16/01/20 02:47:47 INFO mapreduce.Job: map 50% reduce 0%
16/01/20 02:48:08 INFO mapreduce.Job: map 83% reduce 0%
16/01/20 02:48:16 INFO mapreduce.Job: map 100% reduce 0%
16/01/20 02:48:31 INFO mapreduce.Job: map 100% reduce 31%
16/01/20 02:48:34 INFO mapreduce.Job: map 100% reduce 33%
16/01/20 02:50:30 INFO mapreduce.Job: map 100% reduce 34%
16/01/20 03:01:18 INFO mapreduce.Job: map 100% reduce 35%
16/01/20 03:11:58 INFO mapreduce.Job: map 100% reduce 36%
16/01/20 03:22:50 INFO mapreduce.Job: map 100% reduce 37%
16/01/20 03:24:22 INFO mapreduce.Job: map 100% reduce 50%
16/01/20 03:24:35 INFO mapreduce.Job: map 100% reduce 82%
16/01/20 03:24:38 INFO mapreduce.Job: map 100% reduce 83%
16/01/20 03:26:33 INFO mapreduce.Job: map 100% reduce 84%
16/01/20 03:37:35 INFO mapreduce.Job: map 100% reduce 85%
16/01/20 03:39:38 INFO mapreduce.Job: Task Id :
attempt_1453210838763_0011_r_000001_0, Status : FAILED
*Error: java.lang.IllegalArgumentException: Row length 41221 is > 32767*
at org.apache.hadoop.hbase.client.Mutation.checkRow(Mutation.java:506)
at org.apache.hadoop.hbase.client.Mutation.checkRow(Mutation.java:487)
at org.apache.hadoop.hbase.client.Get.<init>(Get.java:89)
at org.apache.gora.hbase.store.HBaseStore.get(HBaseStore.java:208)
at org.apache.gora.hbase.store.HBaseStore.get(HBaseStore.java:79)
at org.apache.gora.store.impl.DataStoreBase.get(DataStoreBase.java:156)
at org.apache.gora.store.impl.DataStoreBase.get(DataStoreBase.java:56)
at
org.apache.nutch.crawl.DbUpdateReducer.reduce(DbUpdateReducer.java:114)
at
org.apache.nutch.crawl.DbUpdateReducer.reduce(DbUpdateReducer.java:42)
at org.apache.hadoop.mapreduce.Reducer.run(Reducer.java:171)
at
org.apache.hadoop.mapred.ReduceTask.runNewReducer(ReduceTask.java:627)
at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:389)
at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:168)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1614)
at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:163)
16/01/20 03:39:39 INFO mapreduce.Job: map 100% reduce 50%
16/01/20 03:39:52 INFO mapreduce.Job: map 100% reduce 82%
16/01/20 03:39:55 INFO mapreduce.Job: map 100% reduce 83%
16/01/20 03:41:56 INFO mapreduce.Job: map 100% reduce 84%
16/01/20 03:53:39 INFO mapreduce.Job: map 100% reduce 85%
16/01/20 03:55:49 INFO mapreduce.Job: Task Id :
attempt_1453210838763_0011_r_000001_1, Status : FAILED
*Error: java.lang.IllegalArgumentException: Row length 41221 is > 32767*
at org.apache.hadoop.hbase.client.Mutation.checkRow(Mutation.java:506)
at org.apache.hadoop.hbase.client.Mutation.checkRow(Mutation.java:487)
at org.apache.hadoop.hbase.client.Get.<init>(Get.java:89)
at org.apache.gora.hbase.store.HBaseStore.get(HBaseStore.java:208)
at org.apache.gora.hbase.store.HBaseStore.get(HBaseStore.java:79)
at org.apache.gora.store.impl.DataStoreBase.get(DataStoreBase.java:156)
at org.apache.gora.store.impl.DataStoreBase.get(DataStoreBase.java:56)
at
org.apache.nutch.crawl.DbUpdateReducer.reduce(DbUpdateReducer.java:114)
at
org.apache.nutch.crawl.DbUpdateReducer.reduce(DbUpdateReducer.java:42)
at org.apache.hadoop.mapreduce.Reducer.run(Reducer.java:171)
at
org.apache.hadoop.mapred.ReduceTask.runNewReducer(ReduceTask.java:627)
at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:389)
at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:168)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1614)
at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:163)
16/01/20 03:55:50 INFO mapreduce.Job: map 100% reduce 50%
16/01/20 03:56:01 INFO mapreduce.Job: map 100% reduce 83%
16/01/20 03:58:02 INFO mapreduce.Job: map 100% reduce 84%
16/01/20 04:10:09 INFO mapreduce.Job: map 100% reduce 85%
16/01/20 04:12:33 INFO mapreduce.Job: Task Id :
attempt_1453210838763_0011_r_000001_2, Status : FAILED
*Error: java.lang.IllegalArgumentException: Row length 41221 is > 32767*
at org.apache.hadoop.hbase.client.Mutation.checkRow(Mutation.java:506)
at org.apache.hadoop.hbase.client.Mutation.checkRow(Mutation.java:487)
at org.apache.hadoop.hbase.client.Get.<init>(Get.java:89)
at org.apache.gora.hbase.store.HBaseStore.get(HBaseStore.java:208)
at org.apache.gora.hbase.store.HBaseStore.get(HBaseStore.java:79)
at org.apache.gora.store.impl.DataStoreBase.get(DataStoreBase.java:156)
at org.apache.gora.store.impl.DataStoreBase.get(DataStoreBase.java:56)
at
org.apache.nutch.crawl.DbUpdateReducer.reduce(DbUpdateReducer.java:114)
at
org.apache.nutch.crawl.DbUpdateReducer.reduce(DbUpdateReducer.java:42)
at org.apache.hadoop.mapreduce.Reducer.run(Reducer.java:171)
at
org.apache.hadoop.mapred.ReduceTask.runNewReducer(ReduceTask.java:627)
at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:389)
at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:168)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1614)
at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:163)
16/01/20 04:12:34 INFO mapreduce.Job: map 100% reduce 50%
16/01/20 04:12:45 INFO mapreduce.Job: map 100% reduce 82%
16/01/20 04:12:48 INFO mapreduce.Job: map 100% reduce 83%
16/01/20 04:14:46 INFO mapreduce.Job: map 100% reduce 84%
16/01/20 04:26:53 INFO mapreduce.Job: map 100% reduce 85%
16/01/20 04:29:09 INFO mapreduce.Job: map 100% reduce 100%
16/01/20 04:29:10 INFO mapreduce.Job: Job job_1453210838763_0011 failed
with state FAILED due to: Task failed task_1453210838763_0011_r_000001
Job failed as tasks failed. failedMaps:0 failedReduces:1
16/01/20 04:29:11 INFO mapreduce.Job: Counters: 50
File System Counters
FILE: Number of bytes read=38378343
FILE: Number of bytes written=115957636
FILE: Number of read operations=0
FILE: Number of large read operations=0
FILE: Number of write operations=0
HDFS: Number of bytes read=2382
HDFS: Number of bytes written=0
HDFS: Number of read operations=2
HDFS: Number of large read operations=0
HDFS: Number of write operations=0
Job Counters
Failed reduce tasks=4
Launched map tasks=2
Launched reduce tasks=5
Data-local map tasks=2
Total time spent by all maps in occupied slots (ms)=789909
Total time spent by all reduces in occupied slots (ms)=30215090
Total time spent by all map tasks (ms)=263303
Total time spent by all reduce tasks (ms)=6043018
Total vcore-seconds taken by all map tasks=263303
Total vcore-seconds taken by all reduce tasks=6043018
Total megabyte-seconds taken by all map tasks=808866816
Total megabyte-seconds taken by all reduce tasks=30940252160
Map-Reduce Framework
Map input records=49929
Map output records=1777904
Map output bytes=382773368
Map output materialized bytes=77228942
Input split bytes=2382
Combine input records=0
Combine output records=0
Reduce input groups=754170
Reduce shuffle bytes=38318183
Reduce input records=881156
Reduce output records=754170
Spilled Records=2659060
Shuffled Maps =2
Failed Shuffles=0
Merged Map outputs=2
GC time elapsed (ms)=17993
CPU time spent (ms)=819690
Physical memory (bytes) snapshot=4080136192
Virtual memory (bytes) snapshot=15234293760
Total committed heap usage (bytes)=4149739520
Shuffle Errors
BAD_ID=0
CONNECTION=0
IO_ERROR=0
WRONG_LENGTH=0
WRONG_MAP=0
WRONG_REDUCE=0
File Input Format Counters
Bytes Read=0
File Output Format Counters
Bytes Written=0
Exception in thread "main" java.lang.RuntimeException: job failed:
name=[1]update-table, jobid=job_1453210838763_0011
at org.apache.nutch.util.NutchJob.waitForCompletion(NutchJob.java:120)
at org.apache.nutch.crawl.DbUpdaterJob.run(DbUpdaterJob.java:111)
at
org.apache.nutch.crawl.DbUpdaterJob.updateTable(DbUpdaterJob.java:140)
at org.apache.nutch.crawl.DbUpdaterJob.run(DbUpdaterJob.java:174)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.nutch.crawl.DbUpdaterJob.main(DbUpdaterJob.java:178)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.apache.hadoop.util.RunJar.main(RunJar.java:212)
Error running:
/usr/share/searchEngine/nutch-branch-2.3.1/runtime/deploy/bin/nutch
updatedb -D mapred.reduce.tasks=2 -D mapred.child.java.opts=-Xmx1000m -D
mapred.reduce.tasks.speculative.execution=false -D
mapred.map.tasks.speculative.execution=false -D
mapred.compress.map.output=true 1453230757-13191 -crawlId 1
Failed with exit value 1.
****************************************************LOG
END************************************************************************************************
Please advise.
--
------------------------------
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