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https://issues.apache.org/jira/browse/HIVE-4827?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13715424#comment-13715424
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Brock Noland commented on HIVE-4827:
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Yeah that test is flaky. I just submitted another run of the precommit.
                
> Merge a Map-only job to its following MapReduce job with multiple inputs
> ------------------------------------------------------------------------
>
>                 Key: HIVE-4827
>                 URL: https://issues.apache.org/jira/browse/HIVE-4827
>             Project: Hive
>          Issue Type: Improvement
>          Components: Query Processor
>    Affects Versions: 0.12.0
>            Reporter: Yin Huai
>            Assignee: Yin Huai
>         Attachments: HIVE-4827.1.patch, HIVE-4827.2.patch
>
>
> When hive.optimize.mapjoin.mapreduce is on, CommonJoinResolver can attach a 
> Map-only job (MapJoin) to its following MapReduce job. But this merge only 
> happens when the MapReduce job has a single input. With Correlation Optimizer 
> (HIVE-2206), it is possible that the MapReduce job can have multiple inputs 
> (for multiple operation paths). It is desired to improve CommonJoinResolver 
> to merge a Map-only job to the corresponding Map task of the MapReduce job.
> Example:
> {code:sql}
> set hive.optimize.correlation=true;
> set hive.auto.convert.join=true;
> set hive.optimize.mapjoin.mapreduce=true;
> SELECT tmp1.key, count(*)
> FROM (SELECT x1.key1 AS key
>       FROM bigTable1 x1 JOIN smallTable1 y1 ON (x1.key1 = y1.key1)
>       GROUP BY x1.key1) tmp1
> JOIN (SELECT x2.key2 AS key
>       FROM bigTable2 x2 JOIN smallTable2 y2 ON (x2.key2 = y2.key2)
>       GROUP BY x2.key2) tmp2
> ON (tmp1.key = tmp2.key)
> GROUP BY tmp1.key;
> {\code}
> In this query, join operations inside tmp1 and tmp2 will be converted to two 
> MapJoins. With Correlation Optimizer, aggregations in tmp1, tmp2, and join of 
> tmp1 and tmp2, and the last aggregation will be executed in the same 
> MapReduce job (Reduce side). Since this MapReduce job has two inputs, right 
> now, CommonJoinResolver cannot attach two MapJoins to the Map side of a 
> MapReduce job.
> Another example:
> {code:sql}
> SELECT tmp1.key
> FROM (SELECT x1.key2 AS key
>       FROM bigTable1 x1 JOIN smallTable1 y1 ON (x1.key1 = y1.key1)
>       UNION ALL
>       SELECT x2.key2 AS key
>       FROM bigTable2 x2 JOIN smallTable2 y2 ON (x2.key1 = y2.key1)) tmp1
> {\code}
> For this case, we will have three Map-only jobs (two for MapJoins and one for 
> Union). It will be good to use a single Map-only job to execute this query.

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