You probably have mix-matched datanucleus libraries in your lib/ folder. You should only three 3.2.x files if you do "ls datanu*". To avoid that, you need to do "ant very-clean" before building hive.
--Xuefu On Tue, Aug 6, 2013 at 4:39 PM, Eric Chu <e...@rocketfuel.com> wrote: > Hi, > > I'm a bit confused about what DataNucleus patches we should get for *Hive > 0.11 with JDK 6*. It'd be great if people working on that could shed some > light on the subject. Thanks in advance! > > After installing Hive 0.11 and applying the patch for HIVE-4619 (or else MR > queries will result in error), I will sometimes (but not always) see > DataNucleus error log messages as below: > > 13/08/06 12:32:33 ERROR DataNucleus.Plugin: Bundle "org.eclipse.jdt.core" > requires "org.eclipse.core.resources" but it cannot be resolved. > 13/08/06 12:32:33 ERROR DataNucleus.Plugin: Bundle "org.eclipse.jdt.core" > requires "org.eclipse.core.runtime" but it cannot be resolved. > 13/08/06 12:32:33 ERROR DataNucleus.Plugin: Bundle "org.eclipse.jdt.core" > requires "org.eclipse.text" but it cannot be resolved. > > HIVE-2015 was opened for this issue, but the last comment there said it was > fixed through HIVE-3632, whose purpose is to upgrade DataNucleus to support > JDK 7. HIVE-3632 in turn was blocked by HIVE-4900 and broke HIVE-4942, both > of which have patches available in 12. So I ended up applying HIVE-4900, > HIVE-3632, and HIVE-4942, in that order. However, afterward, any query (MR, > select *, show tables) would result in error. > > In the end, after I applied the patch for HIVE-4900, I haven't seen those > error messages and queries are still running fine. Are the other patches > not compatible with JDK 6? > > *Error messages for SHOW TABLES after applying HIVE-4900, HIVE-3632, and > HIVE-4942:* > > FAILED: Error in metadata: java.lang.RuntimeException: Unable to > instantiate org.apache.hadoop.hive.metastore.HiveMetaStoreClient > 13/08/06 12:31:01 ERROR exec.Task: FAILED: Error in metadata: > java.lang.RuntimeException: Unable to instantiate > org.apache.hadoop.hive.metastore.HiveMetaStoreClient > org.apache.hadoop.hive.ql.metadata.HiveException: > java.lang.RuntimeException: Unable to instantiate > org.apache.hadoop.hive.metastore.HiveMetaStoreClient > at org.apache.hadoop.hive.ql.metadata.Hive.getDatabase(Hive.java:1140) > at org.apache.hadoop.hive.ql.metadata.Hive.databaseExists(Hive.java:1125) > at org.apache.hadoop.hive.ql.exec.DDLTask.showTables(DDLTask.java:2265) > at org.apache.hadoop.hive.ql.exec.DDLTask.execute(DDLTask.java:337) > at org.apache.hadoop.hive.ql.exec.Task.executeTask(Task.java:144) > at > org.apache.hadoop.hive.ql.exec.TaskRunner.runSequential(TaskRunner.java:57) > at org.apache.hadoop.hive.ql.Driver.launchTask(Driver.java:1361) > at org.apache.hadoop.hive.ql.Driver.execute(Driver.java:1146) > at org.apache.hadoop.hive.ql.Driver.run(Driver.java:948) > at org.apache.hadoop.hive.cli.CliDriver.processLocalCmd(CliDriver.java:261) > at org.apache.hadoop.hive.cli.CliDriver.processCmd(CliDriver.java:218) > at org.apache.hadoop.hive.cli.CliDriver.processLine(CliDriver.java:415) > at org.apache.hadoop.hive.cli.CliDriver.run(CliDriver.java:758) > at org.apache.hadoop.hive.cli.CliDriver.main(CliDriver.java:616) > at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > at > > sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) > at > > sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) > at java.lang.reflect.Method.invoke(Method.java:597) > at org.apache.hadoop.util.RunJar.main(RunJar.java:208) > Caused by: java.lang.RuntimeException: Unable to instantiate > org.apache.hadoop.hive.metastore.HiveMetaStoreClient > at > > org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1139) > at > > org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:51) > at > > org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:61) > at > > org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:2284) > at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:2295) > at org.apache.hadoop.hive.ql.metadata.Hive.getDatabase(Hive.java:1136) > ... 18 more > Caused by: java.lang.reflect.InvocationTargetException > at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) > at > > sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) > at > > sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) > at java.lang.reflect.Constructor.newInstance(Constructor.java:513) > at > > org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1137) > ... 23 more > Caused by: javax.jdo.JDOFatalInternalException: Unexpected exception > caught. > NestedThrowables: > java.lang.reflect.InvocationTargetException > at > > javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1186) > at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:803) > at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:698) > at > org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:262) > at > > org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:291) > at > > org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:224) > at > org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:199) > at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:70) > at > > org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:130) > at > > org.apache.hadoop.hive.metastore.RetryingRawStore.<init>(RetryingRawStore.java:62) > at > > org.apache.hadoop.hive.metastore.RetryingRawStore.getProxy(RetryingRawStore.java:71) > at > > org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:413) > at > > org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:401) > at > > org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:439) > at > > org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:325) > at > > org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.<init>(HiveMetaStore.java:285) > at > > org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:53) > at > > org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:58) > at > > org.apache.hadoop.hive.metastore.HiveMetaStore.newHMSHandler(HiveMetaStore.java:4102) > at > > org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:121) > ... 28 more > Caused by: java.lang.reflect.InvocationTargetException > at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > at > > sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) > at > > sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) > at java.lang.reflect.Method.invoke(Method.java:597) > at javax.jdo.JDOHelper$16.run(JDOHelper.java:1958) > at java.security.AccessController.doPrivileged(Native Method) > at javax.jdo.JDOHelper.invoke(JDOHelper.java:1953) > at > > javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1159) > ... 47 more > Caused by: java.lang.NoSuchFieldError: NUCLEUS_CONTEXT_LOADER > at org.datanucleus.NucleusContext.<clinit>(NucleusContext.java:105) > at > > org.datanucleus.api.jdo.JDOPersistenceManagerFactory.<init>(JDOPersistenceManagerFactory.java:395) > at > > org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:294) > at > > org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:195) > ... 55 more > > FAILED: Execution Error, return code 1 from > org.apache.hadoop.hive.ql.exec.DDLTask > 13/08/06 12:31:01 ERROR ql.Driver: FAILED: Execution Error, return code 1 > from org.apache.hadoop.hive.ql.exec.DDLTask >
