[
https://issues.apache.org/jira/browse/MARMOTTA-136?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13599177#comment-13599177
]
Sebastian Schaffert commented on MARMOTTA-136:
----------------------------------------------
The problem is probably related to the doctype attributes in the xsl:output
element (maybe simply try removing them?):
doctype-public="-//W3C//DTD XHTML 1.0 Strict//EN"
doctype-system="http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd";
My suggestion is to try removing these attributes and changing the output
method to "html" (instead xml).
Maybe the better solution is to not use XSLT anymore. Freemarker would probably
be sufficient to achieve this goal. The XSL stylesheet is anyways very
simplistic.
> SPARQL HTML results not working
> -------------------------------
>
> Key: MARMOTTA-136
> URL: https://issues.apache.org/jira/browse/MARMOTTA-136
> Project: Marmotta
> Issue Type: Improvement
> Components: Triple Store, Web Services
> Affects Versions: 2.6
> Reporter: Sergio Fernández
> Assignee: Sebastian Schaffert
> Fix For: 3.0-incubating
>
>
> Since e always use snorql for such kind of operations, we didn't realized of
> this bug. But working on MARMOTTA-135 I got it. I already fixed an issue
> regarding the location of the XSLT file, but requesting the select endpoint
> directly with a query we got the following exception:
> ERROR: 'A DocType cannot be added after the root element'
> 14:35:09.974 WARN - Rolling back transaction due to connection close
> java.lang.Throwable: null
> at
> org.openrdf.sail.helpers.SailConnectionBase.close(SailConnectionBase.java:241)
> [sesame-sail-api-2.7.0-beta2.jar:na]
> at
> org.openrdf.sail.helpers.SailConnectionWrapper.close(SailConnectionWrapper.java:88)
> [sesame-sail-api-2.7.0-beta2.jar:na]
> at
> org.openrdf.sail.helpers.SailConnectionWrapper.close(SailConnectionWrapper.java:88)
> [sesame-sail-api-2.7.0-beta2.jar:na]
> at
> org.openrdf.repository.sail.SailRepositoryConnection.close(SailRepositoryConnection.java:129)
> [sesame-repository-sail-2.7.0-beta2.jar:na]
> at
> org.apache.marmotta.platform.sparql.services.sparql.SparqlServiceImpl.query(SparqlServiceImpl.java:105)
> [marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.sparql.services.sparql.SparqlServiceImpl$Proxy$_$$_WeldClientProxy.query(SparqlServiceImpl$Proxy$_$$_WeldClientProxy.java)
> [marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.sparql.webservices.SparqlWebService$1.write(SparqlWebService.java:485)
> [marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.jboss.resteasy.plugins.providers.StreamingOutputProvider.writeTo(StreamingOutputProvider.java:32)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.providers.StreamingOutputProvider.writeTo(StreamingOutputProvider.java:17)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.interception.MessageBodyWriterContextImpl.proceed(MessageBodyWriterContextImpl.java:117)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.interceptors.encoding.GZIPEncodingInterceptor.write(GZIPEncodingInterceptor.java:104)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.interception.MessageBodyWriterContextImpl.proceed(MessageBodyWriterContextImpl.java:123)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.ServerResponse.writeTo(ServerResponse.java:250)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.SynchronousDispatcher.writeJaxrsResponse(SynchronousDispatcher.java:602)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invoke(SynchronousDispatcher.java:528)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invokePropagateNotFound(SynchronousDispatcher.java:169)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.server.servlet.ServletContainerDispatcher.service(ServletContainerDispatcher.java:212)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.server.servlet.FilterDispatcher.doFilter(FilterDispatcher.java:59)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:186)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.ModuleResourceFilter.doFilter(ModuleResourceFilter.java:163)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.ModuleResourceFilter$Proxy$_$$_WeldClientProxy.doFilter(ModuleResourceFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:183)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.MarmottaServerNameFilter.doFilter(MarmottaServerNameFilter.java:104)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.TemplatingFilter.doFilter(TemplatingFilter.java:175)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.TemplatingFilter$Proxy$_$$_WeldClientProxy.doFilter(TemplatingFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter.doFilter(MarmottaAccessControlFilter.java:142)
> [marmotta-security-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.doFilter(MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-security-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter.doFilter(MarmottaAuthenticationFilter.java:163)
> [marmotta-user-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.doFilter(MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-user-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter.doFilter(MarmottaResourceFilter.java:132)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaOptionsFilter.doFilter(MarmottaOptionsFilter.java:96)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaPreStartupFilter.doFilter(MarmottaPreStartupFilter.java:110)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:929)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1002)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:585)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:310)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
> [na:1.6.0_27]
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> [na:1.6.0_27]
> at java.lang.Thread.run(Thread.java:679) [na:1.6.0_27]
> 14:35:10.148 WARN - failed to execute
> javax.ws.rs.WebApplicationException:
> org.openrdf.query.TupleQueryResultHandlerException: error while transforming
> XML results to HTML
> at
> org.apache.marmotta.platform.sparql.webservices.SparqlWebService$1.write(SparqlWebService.java:487)
> ~[marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.jboss.resteasy.plugins.providers.StreamingOutputProvider.writeTo(StreamingOutputProvider.java:32)
> ~[resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.providers.StreamingOutputProvider.writeTo(StreamingOutputProvider.java:17)
> ~[resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.interception.MessageBodyWriterContextImpl.proceed(MessageBodyWriterContextImpl.java:117)
> ~[resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.interceptors.encoding.GZIPEncodingInterceptor.write(GZIPEncodingInterceptor.java:104)
> ~[resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.interception.MessageBodyWriterContextImpl.proceed(MessageBodyWriterContextImpl.java:123)
> ~[resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.ServerResponse.writeTo(ServerResponse.java:250)
> ~[resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.SynchronousDispatcher.writeJaxrsResponse(SynchronousDispatcher.java:602)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invoke(SynchronousDispatcher.java:528)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invokePropagateNotFound(SynchronousDispatcher.java:169)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.server.servlet.ServletContainerDispatcher.service(ServletContainerDispatcher.java:212)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.jboss.resteasy.plugins.server.servlet.FilterDispatcher.doFilter(FilterDispatcher.java:59)
> [resteasy-jaxrs-2.3.5.Final.jar:na]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:186)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.ModuleResourceFilter.doFilter(ModuleResourceFilter.java:163)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.ModuleResourceFilter$Proxy$_$$_WeldClientProxy.doFilter(ModuleResourceFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:183)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.MarmottaServerNameFilter.doFilter(MarmottaServerNameFilter.java:104)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.TemplatingFilter.doFilter(TemplatingFilter.java:175)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.filters.TemplatingFilter$Proxy$_$$_WeldClientProxy.doFilter(TemplatingFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter.doFilter(MarmottaAccessControlFilter.java:142)
> [marmotta-security-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.doFilter(MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-security-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter.doFilter(MarmottaAuthenticationFilter.java:163)
> [marmotta-user-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.doFilter(MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.java)
> [marmotta-user-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter.doFilter(MarmottaResourceFilter.java:132)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaOptionsFilter.doFilter(MarmottaOptionsFilter.java:96)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.marmotta.platform.core.servlet.MarmottaPreStartupFilter.doFilter(MarmottaPreStartupFilter.java:110)
> [marmotta-core-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:929)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1002)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:585)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:310)
> [tomcat-embed-core-7.0.30.jar:7.0.30]
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
> [na:1.6.0_27]
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> [na:1.6.0_27]
> at java.lang.Thread.run(Thread.java:679) [na:1.6.0_27]
> Caused by: org.openrdf.query.TupleQueryResultHandlerException: error while
> transforming XML results to HTML
> at
> org.apache.marmotta.platform.sparql.services.sparqlio.sparqlhtml.SPARQLResultsHTMLWriter.endQueryResult(SPARQLResultsHTMLWriter.java:126)
> ~[marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at org.openrdf.query.QueryResults.report(QueryResults.java:150)
> ~[sesame-query-2.7.0-beta2.jar:na]
> at
> org.openrdf.repository.sail.SailTupleQuery.evaluate(SailTupleQuery.java:74)
> ~[sesame-repository-sail-2.7.0-beta2.jar:na]
> at
> org.apache.marmotta.platform.sparql.services.sparql.SparqlServiceImpl.query(SparqlServiceImpl.java:91)
> ~[marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.sparql.services.sparql.SparqlServiceImpl$Proxy$_$$_WeldClientProxy.query(SparqlServiceImpl$Proxy$_$$_WeldClientProxy.java)
> ~[marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> at
> org.apache.marmotta.platform.sparql.webservices.SparqlWebService$1.write(SparqlWebService.java:485)
> ~[marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> ... 52 common frames omitted
> Caused by: javax.xml.transform.TransformerException:
> org.jdom2.IllegalAddException: A DocType cannot be added after the root
> element
> at
> com.sun.org.apache.xalan.internal.xsltc.trax.TransformerImpl.transform(TransformerImpl.java:720)
> ~[na:1.6.0_27]
> at
> com.sun.org.apache.xalan.internal.xsltc.trax.TransformerImpl.transform(TransformerImpl.java:317)
> ~[na:1.6.0_27]
> at
> org.apache.marmotta.platform.sparql.services.sparqlio.sparqlhtml.SPARQLResultsHTMLWriter.endQueryResult(SPARQLResultsHTMLWriter.java:118)
> ~[marmotta-sparql-3.0.0-incubating-SNAPSHOT.jar:3.0.0-incubating-SNAPSHOT]
> ... 57 common frames omitted
> Caused by: org.jdom2.IllegalAddException: A DocType cannot be added after the
> root element
> at org.jdom2.Document.canContainContent(Document.java:819)
> ~[jdom2-2.0.4.jar:2.0.4]
> at org.jdom2.ContentList.add(ContentList.java:246)
> ~[jdom2-2.0.4.jar:2.0.4]
> at org.jdom2.ContentList.add(ContentList.java:79)
> ~[jdom2-2.0.4.jar:2.0.4]
> at java.util.AbstractList.add(AbstractList.java:108) ~[na:1.6.0_27]
> at org.jdom2.Document.addContent(Document.java:320)
> ~[jdom2-2.0.4.jar:2.0.4]
> at org.jdom2.DefaultJDOMFactory.addContent(DefaultJDOMFactory.java:310)
> ~[jdom2-2.0.4.jar:2.0.4]
> at org.jdom2.input.sax.SAXHandler.startDTD(SAXHandler.java:907)
> ~[jdom2-2.0.4.jar:na]
> at
> org.jdom2.transform.JDOMResult$DocumentBuilder.startDTD(JDOMResult.java:608)
> ~[jdom2-2.0.4.jar:2.0.4]
> at
> com.sun.org.apache.xml.internal.serializer.ToXMLSAXHandler.startElement(ToXMLSAXHandler.java:661)
> ~[na:1.6.0_27]
> at
> com.sun.org.apache.xml.internal.serializer.ToXMLSAXHandler.startElement(ToXMLSAXHandler.java:512)
> ~[na:1.6.0_27]
> at
> GregorSamsa.http$colon$$slash$$slash$www$dot$w3$dot$org$slash$1999$slash$xhtml$colon$template$dot$7()
> ~[na:na]
> at GregorSamsa.applyTemplates() ~[na:na]
> at GregorSamsa.applyTemplates() ~[na:na]
> at GregorSamsa.transform() ~[na:na]
> at
> com.sun.org.apache.xalan.internal.xsltc.runtime.AbstractTranslet.transform(AbstractTranslet.java:607)
> ~[na:1.6.0_27]
> at
> com.sun.org.apache.xalan.internal.xsltc.trax.TransformerImpl.transform(TransformerImpl.java:713)
> ~[na:1.6.0_27]
> ... 59 common frames omitted
> Mar 11, 2013 2:35:10 PM org.apache.catalina.core.StandardWrapperValve invoke
> SEVERE: Servlet.service() for servlet [default] in context with path [] threw
> exception
> org.jboss.resteasy.spi.UnhandledException: Request was committed couldn't
> handle exception
> at
> org.jboss.resteasy.core.SynchronousDispatcher.handleWebApplicationException(SynchronousDispatcher.java:467)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.unwrapException(SynchronousDispatcher.java:379)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.handleWriterException(SynchronousDispatcher.java:415)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.handleException(SynchronousDispatcher.java:238)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.handleWriteResponseException(SynchronousDispatcher.java:222)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invoke(SynchronousDispatcher.java:532)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invokePropagateNotFound(SynchronousDispatcher.java:169)
> at
> org.jboss.resteasy.plugins.server.servlet.ServletContainerDispatcher.service(ServletContainerDispatcher.java:212)
> at
> org.jboss.resteasy.plugins.server.servlet.FilterDispatcher.doFilter(FilterDispatcher.java:59)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:186)
> at
> org.apache.marmotta.platform.core.filters.ModuleResourceFilter.doFilter(ModuleResourceFilter.java:163)
> at
> org.apache.marmotta.platform.core.filters.ModuleResourceFilter$Proxy$_$$_WeldClientProxy.doFilter(ModuleResourceFilter$Proxy$_$$_WeldClientProxy.java)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:183)
> at
> org.apache.marmotta.platform.core.filters.MarmottaServerNameFilter.doFilter(MarmottaServerNameFilter.java:104)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> at
> org.apache.marmotta.platform.core.filters.TemplatingFilter.doFilter(TemplatingFilter.java:175)
> at
> org.apache.marmotta.platform.core.filters.TemplatingFilter$Proxy$_$$_WeldClientProxy.doFilter(TemplatingFilter$Proxy$_$$_WeldClientProxy.java)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> at
> org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter.doFilter(MarmottaAccessControlFilter.java:142)
> at
> org.apache.marmotta.platform.security.filters.MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.doFilter(MarmottaAccessControlFilter$Proxy$_$$_WeldClientProxy.java)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> at
> org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter.doFilter(MarmottaAuthenticationFilter.java:163)
> at
> org.apache.marmotta.platform.user.filters.MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.doFilter(MarmottaAuthenticationFilter$Proxy$_$$_WeldClientProxy.java)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter$LMFFilterChain.doFilter(MarmottaResourceFilter.java:181)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaResourceFilter.doFilter(MarmottaResourceFilter.java:132)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaOptionsFilter.doFilter(MarmottaOptionsFilter.java:96)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> at
> org.apache.marmotta.platform.core.servlet.MarmottaPreStartupFilter.doFilter(MarmottaPreStartupFilter.java:110)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123)
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99)
> at
> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:929)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
> at
> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1002)
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:585)
> at
> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:310)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:679)
> Caused by: javax.ws.rs.WebApplicationException:
> org.openrdf.query.TupleQueryResultHandlerException: error while transforming
> XML results to HTML
> at
> org.apache.marmotta.platform.sparql.webservices.SparqlWebService$1.write(SparqlWebService.java:487)
> at
> org.jboss.resteasy.plugins.providers.StreamingOutputProvider.writeTo(StreamingOutputProvider.java:32)
> at
> org.jboss.resteasy.plugins.providers.StreamingOutputProvider.writeTo(StreamingOutputProvider.java:17)
> at
> org.jboss.resteasy.core.interception.MessageBodyWriterContextImpl.proceed(MessageBodyWriterContextImpl.java:117)
> at
> org.jboss.resteasy.plugins.interceptors.encoding.GZIPEncodingInterceptor.write(GZIPEncodingInterceptor.java:104)
> at
> org.jboss.resteasy.core.interception.MessageBodyWriterContextImpl.proceed(MessageBodyWriterContextImpl.java:123)
> at
> org.jboss.resteasy.core.ServerResponse.writeTo(ServerResponse.java:250)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.writeJaxrsResponse(SynchronousDispatcher.java:602)
> at
> org.jboss.resteasy.core.SynchronousDispatcher.invoke(SynchronousDispatcher.java:528)
> ... 44 more
> Caused by: org.openrdf.query.TupleQueryResultHandlerException: error while
> transforming XML results to HTML
> at
> org.apache.marmotta.platform.sparql.services.sparqlio.sparqlhtml.SPARQLResultsHTMLWriter.endQueryResult(SPARQLResultsHTMLWriter.java:126)
> at org.openrdf.query.QueryResults.report(QueryResults.java:150)
> at
> org.openrdf.repository.sail.SailTupleQuery.evaluate(SailTupleQuery.java:74)
> at
> org.apache.marmotta.platform.sparql.services.sparql.SparqlServiceImpl.query(SparqlServiceImpl.java:91)
> at
> org.apache.marmotta.platform.sparql.services.sparql.SparqlServiceImpl$Proxy$_$$_WeldClientProxy.query(SparqlServiceImpl$Proxy$_$$_WeldClientProxy.java)
> at
> org.apache.marmotta.platform.sparql.webservices.SparqlWebService$1.write(SparqlWebService.java:485)
> ... 52 more
> Caused by: javax.xml.transform.TransformerException:
> org.jdom2.IllegalAddException: A DocType cannot be added after the root
> element
> at
> com.sun.org.apache.xalan.internal.xsltc.trax.TransformerImpl.transform(TransformerImpl.java:720)
> at
> com.sun.org.apache.xalan.internal.xsltc.trax.TransformerImpl.transform(TransformerImpl.java:317)
> at
> org.apache.marmotta.platform.sparql.services.sparqlio.sparqlhtml.SPARQLResultsHTMLWriter.endQueryResult(SPARQLResultsHTMLWriter.java:118)
> ... 57 more
> Caused by: org.jdom2.IllegalAddException: A DocType cannot be added after the
> root element
> at org.jdom2.Document.canContainContent(Document.java:819)
> at org.jdom2.ContentList.add(ContentList.java:246)
> at org.jdom2.ContentList.add(ContentList.java:79)
> at java.util.AbstractList.add(AbstractList.java:108)
> at org.jdom2.Document.addContent(Document.java:320)
> at org.jdom2.DefaultJDOMFactory.addContent(DefaultJDOMFactory.java:310)
> at org.jdom2.input.sax.SAXHandler.startDTD(SAXHandler.java:907)
> at
> org.jdom2.transform.JDOMResult$DocumentBuilder.startDTD(JDOMResult.java:608)
> at
> com.sun.org.apache.xml.internal.serializer.ToXMLSAXHandler.startElement(ToXMLSAXHandler.java:661)
> at
> com.sun.org.apache.xml.internal.serializer.ToXMLSAXHandler.startElement(ToXMLSAXHandler.java:512)
> at
> GregorSamsa.http$colon$$slash$$slash$www$dot$w3$dot$org$slash$1999$slash$xhtml$colon$template$dot$7()
> at GregorSamsa.applyTemplates()
> at GregorSamsa.applyTemplates()
> at GregorSamsa.transform()
> at
> com.sun.org.apache.xalan.internal.xsltc.runtime.AbstractTranslet.transform(AbstractTranslet.java:607)
> at
> com.sun.org.apache.xalan.internal.xsltc.trax.TransformerImpl.transform(TransformerImpl.java:713)
> ... 59 more
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