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https://issues.apache.org/jira/browse/PDFBOX-5472?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17562258#comment-17562258
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Tilman Hausherr commented on PDFBOX-5472:
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I haven't used unix since the 90ies so I'm not really an expert about this. And 
this sounds like a unix problem, and as I said, we don't do any unix-specific 
things for saving. The only unix-specific thing in our code are the names of 
the directories where we search for fonts.

Is the saved file valid? If yes, then why care about this number?

"updating OS at this moment is not an option" - sooner or later you'll have to, 
to avoid security issues.

Other things to do
- run fsck on your file system
- update java (you should always do that)

> PDDocument save(File) is used to create file in unix. But file is being 
> created with link count as 0
> ----------------------------------------------------------------------------------------------------
>
>                 Key: PDFBOX-5472
>                 URL: https://issues.apache.org/jira/browse/PDFBOX-5472
>             Project: PDFBox
>          Issue Type: Bug
>            Reporter: Abhishek
>            Priority: Major
>
> PDDocument save(File) is used to create file in unix.
> But file is being created with link count as 0.
> This method is being called in a loop, to create > 10 files at a time. But we 
> notices that first or first two files are always being created with 0 link 
> count in unix file system.



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