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https://issues.apache.org/jira/browse/PHOENIX-4466?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16294521#comment-16294521
]
Toshihiro Suzuki commented on PHOENIX-4466:
-------------------------------------------
I captured network packets by using tcpdump when the issue was reproduced. The
output is as follows:
{code}
15:03:50.422898 IP (tos 0x0, ttl 64, id 30259, offset 0, flags [DF], proto TCP
(6), length 52)
172.26.101.78.8765 > 172.26.101.77.48206: Flags [.], cksum 0x22f7
(incorrect -> 0x0d32), seq 3933046844, ack 1437099126, win 118, options
[nop,nop,TS val 393018895 ecr 393022983], length 0
E..4v3@[email protected]"=.N.m.<U.dv...v"......
.l...m..
15:03:50.428837 IP (tos 0x0, ttl 64, id 30260, offset 0, flags [DF], proto TCP
(6), length 1450)
172.26.101.78.8765 > 172.26.101.77.48206: Flags [.], cksum 0x286d
(incorrect -> 0xaa7d), seq 3933046844:3933048242, ack 1437099126, win 118,
options [nop,nop,TS val 393018901 ecr 393022983], length 1398
E...v4@[email protected]"=.N.m.<U.dv...v(m.....
.l...m..HTTP/1.1 500 Server Error
Date: Mon, 04 Dec 2017 15:03:50 GMT
Content-Type: application/octet-stream;charset=utf-8
Content-Length: 1821
Server: Jetty(9.2.z-SNAPSHOT)
8org.apache.calcite.avatica.proto.Responses$ErrorResponse..
..java.lang.IllegalArgumentException: Cannot fetch parser for Request with
missing class name
at
org.apache.calcite.avatica.remote.ProtobufTranslationImpl.getParserForRequest(ProtobufTranslationImpl.java:260)
at
org.apache.calcite.avatica.remote.ProtobufTranslationImpl.parseRequest(ProtobufTranslationImpl.java:365)
at
org.apache.calcite.avatica.remote.ProtobufHandler.decode(ProtobufHandler.java:51)
at
org.apache.calcite.avatica.remote.ProtobufHandler.decode(ProtobufHandler.java:31)
at
org.apache.calcite.avatica.remote.AbstractHandler.apply(AbstractHandler.java:93)
at
org.apache.calcite.avatica.remote.ProtobufHandler.apply(ProtobufHandler.java:46)
at
org.apache.calcite.avatica.server.AvaticaProtobufHandler.handle(AvaticaProtobufHandler.java:127)
at
org.apache.phoenix.shaded.org.eclipse.jetty.server.handler.HandlerList.handle(HandlerList.java:52)
at
org.apache.phoenix.shaded.org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
at
org.apache.phoenix.shaded.org.eclipse.jetty.server.Server.handle(Server.java:499)
at
org.apache.phoenix.shaded.org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:311)
at org
15:03:50.428853 IP (tos 0x0, ttl 64, id 30261, offset 0, flags [DF], proto TCP
(6), length 648)
172.26.101.78.8765 > 172.26.101.77.48206: Flags [P.], cksum 0x254b
(incorrect -> 0x9526), seq 3933048242:3933048838, ack 1437099126, win 118,
options [nop,nop,TS val 393018901 ecr 393022983], length 596
E...v5@[email protected]"=.N.m..U.dv...v%K.....
.l...m...apache.phoenix.shaded.org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257)
at
org.apache.phoenix.shaded.org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:544)
at
org.apache.phoenix.shaded.org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
at
org.apache.phoenix.shaded.org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
at java.lang.Thread.run(Thread.java:745)
.QIllegalArgumentException: Cannot fetch parser for Request with missing class
name .....*.000002.
.master1.openstacklocal:87658.
{code}
According to the above, it seems like the message format was not correct.
Also, one more thing I noticed is that it looks like the exception in the
description indicates the client used JSON serialization:
{code}
at
org.apache.calcite.avatica.remote.JsonService.apply(JsonService.java:227)
{code}
I finally found there is Avatica jar conflict between phoenix-thin-client jar
and spark-assembly jar.
It seems like both phoenix-thin-client jar and spark-assembly jar depend on
calcite-avatica jar, but the version is different.
(In HDP-2.6.3, phoenix-thin-client jar depends on calcite-avatica-1.8.0.2.6.1.0
and spark-assembly jar depends on calcite-avatica-1.2.0-incubating.)
When I ran spark-shell with -verbose:class, the following was shown:
{code}
...
[Loaded org.apache.calcite.avatica.UnregisteredDriver from
file:/usr/hdp/2.6.3.0-235/spark/lib/spark-assembly-1.6.3.2.6.3.0-235-hadoop2.7.3.2.6.3.0-235.jar]
[Loaded org.apache.calcite.avatica.remote.Driver from
file:/usr/hdp/2.6.3.0-235/spark/lib/spark-assembly-1.6.3.2.6.3.0-235-hadoop2.7.3.2.6.3.0-235.jar]
[Loaded org.apache.calcite.avatica.Handler from
file:/usr/hdp/2.6.3.0-235/spark/lib/spark-assembly-1.6.3.2.6.3.0-235-hadoop2.7.3.2.6.3.0-235.jar]
...
{code}
This means the classes in calcite-avatica from spark-assembly jar
(1.2.0-incubating) were used.
Since calcite-avatica-1.2.0-incubating doesn't support PROTOBUF serialization
and it supports only JSON serialization, the error occurs in this case.
Therefore, we need to hide the calcite-avatica dependency in
phoenix-thin-client jar from spark-assembly jar.
> java.lang.RuntimeException: response code 500 - Executing a spark job to
> connect to phoenix query server and load data
> ----------------------------------------------------------------------------------------------------------------------
>
> Key: PHOENIX-4466
> URL: https://issues.apache.org/jira/browse/PHOENIX-4466
> Project: Phoenix
> Issue Type: Bug
> Environment: HDP-2.6.3
> Reporter: Toshihiro Suzuki
> Assignee: Toshihiro Suzuki
> Priority: Minor
>
> Steps to reproduce are as follows:
> 1. Start spark shell with
> {code:Bash}
> spark-shell --jars /usr/hdp/current/phoenix-client/phoenix-thin-client.jar
> {code}
> 2. Ran the following to load data
> {code:Scala}
> scala> val query =
> sqlContext.read.format("jdbc").option("driver","org.apache.phoenix.queryserver.client.Driver").option("url","jdbc:phoenix:thin:url=http://<phoenix
> query server
> hostname>:8765;serialization=PROTOBUF").option("dbtable","<table name>").load
> {code}
> This failed with the following exception
> {code:java}
> java.sql.SQLException: While closing connection
> at org.apache.calcite.avatica.Helper.createException(Helper.java:39)
> at
> org.apache.calcite.avatica.AvaticaConnection.close(AvaticaConnection.java:156)
> at
> org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.resolveTable(JDBCRDD.scala:153)
> at
> org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation.<init>(JDBCRelation.scala:91)
> at
> org.apache.spark.sql.execution.datasources.jdbc.DefaultSource.createRelation(DefaultSource.scala:57)
> at
> org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:158)
> at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:119)
> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:25)
> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:30)
> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:32)
> at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:34)
> at $iwC$$iwC$$iwC$$iwC.<init>(<console>:36)
> at $iwC$$iwC$$iwC.<init>(<console>:38)
> at $iwC$$iwC.<init>(<console>:40)
> at $iwC.<init>(<console>:42)
> at <init>(<console>:44)
> at .<init>(<console>:48)
> at .<clinit>(<console>)
> at .<init>(<console>:7)
> at .<clinit>(<console>)
> at $print(<console>)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
> at
> org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
> at
> org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
> at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
> at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
> at
> org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
> at
> org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
> at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
> at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
> at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
> at
> org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
> at
> scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
> at
> org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
> at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
> at org.apache.spark.repl.Main$.main(Main.scala:31)
> at org.apache.spark.repl.Main.main(Main.scala)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:750)
> at
> org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
> at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
> at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
> at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
> Caused by: java.lang.RuntimeException: response code 500
> at
> org.apache.calcite.avatica.remote.RemoteService.apply(RemoteService.java:45)
> at
> org.apache.calcite.avatica.remote.JsonService.apply(JsonService.java:227)
> at
> org.apache.calcite.avatica.remote.RemoteMeta.closeConnection(RemoteMeta.java:78)
> at
> org.apache.calcite.avatica.AvaticaConnection.close(AvaticaConnection.java:153)
> ... 51 more
> {code}
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