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https://issues.apache.org/jira/browse/TAVERNA-1018?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15997502#comment-15997502
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Raul Palma commented on TAVERNA-1018:
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This happens with Tool service, using the advanced tab and copying there the
code (e.g., python script).
This also happens with Rshell service with the code in the script tab.
I found two workarounds for now:
i) In the case of python script, I uploaded the python script to some URL, and
then in the command tab download it (curl) and execute it.
ii) In the case of r script, replace newlines with "; ".
> newlines are stripped out from embedded scripts (e.g., python) in the t2flow,
> when executing in taverna server
> ---------------------------------------------------------------------------------------------------------------
>
> Key: TAVERNA-1018
> URL: https://issues.apache.org/jira/browse/TAVERNA-1018
> Project: Apache Taverna
> Issue Type: Bug
> Components: Taverna Server
> Reporter: Raul Palma
>
> This problem only occur with taverna server. Taverna workbench seems to be ok.
> Try for instance the simple example t2flow from:
> http://www.myexperiment.org/workflows/4218.html
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