On Wed, 6 Dec 2017 11:57:28 +0000, Stian Soiland-Reyes <[email protected]> wrote:
> Thanks for testing, Dmitry!
>
> As that pull request just modifies the NOTICE file I think
> most of these are caused by missing dependencies in `master` for
> incubator-taverna-plugin-bioinformatics
>
> (and so should not prevent merging)
>
>
> Dmitry, do you think those dependencies are easily fixable, or shall we
> continue with what we suggested earlier to move
> incubator-taverna-plugin-bioinformatics to
> https://github.com/taverna-extras due to other license issues?
>
> See also
> https://lists.apache.org/thread.html/674a3571cdb992ba6cf2b054c7c5a281680e58dd5a2d1dac6b22ad3c@%3Cdev.taverna.apache.org%3E
>
>
> On Wed, 6 Dec 2017 12:33:36 +0100, Dmitry Repchevsky <[email protected]> wrote:
> > Hello Stian,
> >
> > https://github.com/apache/incubator-taverna-plugin-bioinformatics/pulls
> >
> > Win10/Netbeans 8.2/ Java8_151
> > Voided maven repo.
> >
> > Changes detected - recompiling the module!
> > Compiling 11 source files to
> > D:\PROJECTS\Taverna\incubator-taverna-plugin-bioinformatics\taverna-biomart-martservice\target\test-classes
> > -------------------------------------------------------------
> > COMPILATION ERROR :
> > -------------------------------------------------------------
> > error reading
> > C:\Users\redmitry\.m2\repository\junit\junit\4.11\junit-4.11.jar; error
> > in opening zip file
> > error reading
> > C:\Users\redmitry\.m2\repository\junit\junit\4.11\junit-4.11.jar; error
> > in opening zip file
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[20,17]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[21,17]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[22,24]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[22,1]
> >
> > static import only from classes and interfaces
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[23,24]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[23,1]
> >
> > static import only from classes and interfaces
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[34,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[36,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[22,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[28,46]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[29,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[31,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[26,38]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[44,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[46,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[26,32]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[29,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[35,17]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[37,17]
> >
> > cannot find symbol
> > symbol: class Link
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[41,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[49,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[23,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[34,48]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[41,17]
> >
> > cannot find symbol
> > symbol: class MartService
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[45,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[49,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[53,17]
> >
> > cannot find symbol
> > symbol: class MartRegistry
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java:[26,43]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[26,33]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[31,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class FilterTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[33,17]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class FilterTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[35,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class FilterTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[26,34]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[29,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[35,17]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[41,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[43,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java:[26,42]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java:[27,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartURLLocationTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[26,39]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[28,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartRegistryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[30,17]
> >
> > cannot find symbol
> > symbol: class MartRegistry
> > location: class MartRegistryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java:[20,24]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java:[22,17]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[38,10]
> >
> > cannot find symbol
> > symbol: class Before
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[46,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[53,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[61,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[67,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[76,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[97,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[105,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[115,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[126,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[133,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[141,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java:[33,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class MartServiceUtilsTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[42,31]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[43,33]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[48,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[48,43]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[56,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[56,38]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[143,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[143,44]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[45,17]
> >
> > cannot find symbol
> > symbol: variable super
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[50,43]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[51,47]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[60,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[60,49]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[73,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[73,49]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[54,17]
> >
> > cannot find symbol
> > symbol: variable super
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[63,39]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[72,35]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[245,39]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[287,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[287,48]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[301,52]
> >
> > cannot find symbol
> > symbol: class MartRegistry
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[312,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[312,48]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[314,30]
> >
> > cannot find symbol
> > symbol: variable MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[316,28]
> >
> > cannot find symbol
> > symbol: variable MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[55,17]
> >
> > cannot find symbol
> > symbol: variable super
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[57,33]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[61,30]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[63,28]
> >
> > cannot find symbol
> > symbol: class Link
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[66,31]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[77,29]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[84,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[84,35]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[94,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[94,35]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > 102 errors
> > -------------------------------------------------------------
> > ------------------------------------------------------------------------
> > Reactor Summary:
> >
> > MartService ........................................ FAILURE [05:20 min]
> > Taverna 2 Biomart Activity. ........................ SKIPPED
> > Taverna 2 Biomart Activity UI ...................... SKIPPED
> > Taverna 2 Biomoby Activity ......................... SKIPPED
> > Taverna 2 Biomoby Activity UI ...................... SKIPPED
> > Taverna 2 NCBI web service Activity UI ............. SKIPPED
> > Taverna 2 Soaplab Activity ......................... SKIPPED
> > Taverna 2 Soaplab Activity UI ...................... SKIPPED
> > Apache Taverna Plugin for Bioinformatics ........... SKIPPED
> > ------------------------------------------------------------------------
> > BUILD FAILURE
> > ------------------------------------------------------------------------
> > Total time: 06:41 min
> > Finished at: 2017-12-06T12:27:20+01:00
> > Final Memory: 27M/213M
> > ------------------------------------------------------------------------
> > Failed to execute goal
> > org.apache.maven.plugins:maven-compiler-plugin:3.1:testCompile
> > (default-testCompile) on project martservice: Compilation failure:
> > Compilation failure:
> > error reading
> > C:\Users\redmitry\.m2\repository\junit\junit\4.11\junit-4.11.jar; error
> > in opening zip file
> > error reading
> > C:\Users\redmitry\.m2\repository\junit\junit\4.11\junit-4.11.jar; error
> > in opening zip file
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[20,17]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[21,17]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[22,24]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[22,1]
> >
> > static import only from classes and interfaces
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[23,24]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[23,1]
> >
> > static import only from classes and interfaces
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[34,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[36,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[22,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[28,46]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[29,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[31,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[26,38]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[44,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[46,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[26,32]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[29,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[35,17]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[37,17]
> >
> > cannot find symbol
> > symbol: class Link
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[41,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[49,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[23,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[34,48]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[41,17]
> >
> > cannot find symbol
> > symbol: class MartService
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[45,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[49,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceXMLHandlerTest.java:[53,17]
> >
> > cannot find symbol
> > symbol: class MartRegistry
> > location: class MartServiceXMLHandlerTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/ui/MartServiceIconsTest.java:[26,43]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[26,33]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[31,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class FilterTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[33,17]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class FilterTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/FilterTest.java:[35,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class FilterTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[26,34]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[29,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[35,17]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[41,17]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/DatasetTest.java:[43,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class DatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java:[26,42]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartURLLocationTest.java:[27,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartURLLocationTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[20,23]
> >
> > package junit.framework does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[26,39]
> >
> > cannot find symbol
> > symbol: class TestCase
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[28,17]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartRegistryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartRegistryTest.java:[30,17]
> >
> > cannot find symbol
> > symbol: class MartRegistry
> > location: class MartRegistryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java:[20,24]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java:[22,17]
> >
> > package org.junit does not exist
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[38,10]
> >
> > cannot find symbol
> > symbol: class Before
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[46,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[53,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[61,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[67,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[76,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[97,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[105,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[115,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[126,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[133,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[141,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartServiceUtilsTest.java:[33,10]
> >
> > cannot find symbol
> > symbol: class Test
> > location: class MartServiceUtilsTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[42,31]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[43,33]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[48,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[48,43]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[56,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[56,38]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[143,17]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/AttributeTest.java:[143,44]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class AttributeTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[45,17]
> >
> > cannot find symbol
> > symbol: variable super
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[50,43]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[51,47]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[60,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[60,49]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[73,17]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/config/event/QueryComponentEventTest.java:[73,49]
> >
> > cannot find symbol
> > symbol: class QueryComponentEvent
> > location: class QueryComponentEventTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[54,17]
> >
> > cannot find symbol
> > symbol: variable super
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[63,39]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[72,35]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[245,39]
> >
> > cannot find symbol
> > symbol: class MartURLLocation
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[287,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[287,48]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[301,52]
> >
> > cannot find symbol
> > symbol: class MartRegistry
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[312,17]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[312,48]
> >
> > cannot find symbol
> > symbol: class MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[314,30]
> >
> > cannot find symbol
> > symbol: variable MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/MartDatasetTest.java:[316,28]
> >
> > cannot find symbol
> > symbol: variable MartDataset
> > location: class MartDatasetTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[55,17]
> >
> > cannot find symbol
> > symbol: variable super
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[57,33]
> >
> > cannot find symbol
> > symbol: class Attribute
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[61,30]
> >
> > cannot find symbol
> > symbol: class Filter
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[63,28]
> >
> > cannot find symbol
> > symbol: class Link
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[66,31]
> >
> > cannot find symbol
> > symbol: class Dataset
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[77,29]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[84,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[84,35]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[94,17]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > /D:/PROJECTS/Taverna/incubator-taverna-plugin-bioinformatics/taverna-biomart-martservice/src/test/java/org/biomart/martservice/query/QueryTest.java:[94,35]
> >
> > cannot find symbol
> > symbol: class Query
> > location: class QueryTest
> > -> [Help 1]
> >
> > To see the full stack trace of the errors, re-run Maven with the -e switch.
> > Re-run Maven using the -X switch to enable full debug logging.
> >
> > For more information about the errors and possible solutions, please
> > read the following articles:
> > [Help 1]
> > http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
> >
> >
> > On 12/6/2017 11:53 AM, Stian Soiland-Reyes wrote:
> > > We have some outstanding pull requests:
> > >
> > > https://github.com/apache/incubator-taverna-plugin-bioinformatics/pulls
> > > https://github.com/apache/incubator-taverna-plugin-gis/pulls
> > > https://github.com/apache/incubator-taverna-common-activities/pulls
> > > https://github.com/apache/incubator-taverna-engine/pulls
> > > https://github.com/apache/incubator-taverna-commandline/pulls
> > > https://github.com/apache/incubator-taverna-server/pulls
> > > https://github.com/apache/incubator-taverna-workbench/pulls
> > > https://github.com/apache/incubator-taverna-workbench-common-activities/pulls
> > >
> > > It would be great if anyone could help review+merge these - just reply
> > > to this email about which one of the above you pick.
> > >
> > > Several of these are from committers. If you made the pull request, feel
> > > free to merge it.
> > >
> > >
> >
