On Thu, 13 Sep 2018 09:25:07 +0500, Rabia Ahmad <rabiana...@gmail.com> wrote: > Is there any method to execute batch file in shell script using Taverna > Workbench, Taverna server or taverna command line tool?
Yes, using the Tool service you can execute any shell commands. http://dev.mygrid.org.uk/wiki/display/tav250/Configuring+a+tool+service You can try to put the script straight into the "Command" tab. The lines will be executed one by one. However if your script is pre-existing file, or have a bit of logic with parameters, etc then you could instead embed the script as a fixed File under Advanced, and then under Command just execute that file with "sh foo.sh" This latter mechanism can also be used to execute scripts in other languages like Python. -- Stian Soiland-Reyes https://orcid.org/0000-0001-9842-9718
