I have a script which runs fine on hive 13(YARN)
I am experimenting with tez. When I run a query on large dataset , I run
into the following error.
0 FATAL [Socket Reader #1 for port 55739]
org.apache.hadoop.yarn.YarnUncaughtExceptionHandler: Thread Thread[Socket
Reader #1 for port 55739,5,main] threw an Error. Shutting down now...
java.lang.OutOfMemoryError: GC overhead limit exceeded
at java.nio.ByteBuffer.allocate(ByteBuffer.java:331)
at
org.apache.hadoop.ipc.Server$Connection.readAndProcess(Server.java:1510)
at org.apache.hadoop.ipc.Server$Listener.doRead(Server.java:750)
at
org.apache.hadoop.ipc.Server$Listener$Reader.doRunLoop(Server.java:624)
at org.apache.hadoop.ipc.Server$Listener$Reader.run(Server.java:595)
2015-12-07 20:31:32,859 FATAL [AsyncDispatcher event handler]
org.apache.hadoop.yarn.event.AsyncDispatcher: Error in dispatcher thread
java.lang.OutOfMemoryError: GC overhead limit exceeded
2015-12-07 20:31:30,590 WARN [IPC Server handler 0 on 55739]
org.apache.hadoop.ipc.Server: IPC Server handler 0 on 55739, call
heartbeat({ containerId=container_1449516549171_0001_01_000100,
requestId=10184, startIndex=0, maxEventsToGet=0, taskAttemptId=null,
eventCount=0 }), rpc version=2, client version=19,
methodsFingerPrint=557389974 from 10.10.30.35:47028 Call#11165 Retry#0:
error: java.lang.OutOfMemoryError: GC overhead limit exceeded
java.lang.OutOfMemoryError: GC overhead limit exceeded
at
javax.security.auth.SubjectDomainCombiner.optimize(SubjectDomainCombiner.java:464)
at
javax.security.auth.SubjectDomainCombiner.combine(SubjectDomainCombiner.java:267)
at
java.security.AccessControlContext.goCombiner(AccessControlContext.java:499)
at
java.security.AccessControlContext.optimize(AccessControlContext.java:407)
at java.security.AccessController.getContext(AccessController.java:501)
at javax.security.auth.Subject.doAs(Subject.java:412)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1548)
at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2007)
2015-12-07 20:32:53,495 INFO [Thread-60]
amazon.emr.metrics.MetricsSaver: Saved 4:3 records to
/mnt/var/em/raw/i-782f08c8_20151207_7921_07921_raw.bin
2015-12-07 20:32:53,495 INFO [AsyncDispatcher event handler]
org.apache.hadoop.yarn.event.AsyncDispatcher: Exiting, bbye..
2015-12-07 20:32:50,435 INFO [IPC Server handler 20 on 55739]
org.apache.hadoop.ipc.Server: IPC Server handler 20 on 55739, call
getTask(org.apache.tez.common.ContainerContext@409a6aa9), rpc version=2,
client version=19, methodsFingerPrint=557389974 from 10.10.30.33:33644
Call#11094
Retry#0: error: java.io.IOException: java.lang.OutOfMemoryError: GC
overhead limit exceeded
java.io.IOException: java.lang.OutOfMemoryError: GC overhead limit
exceeded
2015-12-07 20:32:29,117 WARN [IPC Server handler 23 on 55739]
org.apache.hadoop.ipc.Server: IPC Server handler 23 on 55739, call
getTask(org.apache.tez.common.ContainerContext@7c7e6992), rpc version=2,
client version=19, methodsFingerPrint=557389974 from 10.10.30.38:44218
Call#11260
Retry#0: error: java.lang.OutOfMemoryError: GC overhead limit exceeded
java.lang.OutOfMemoryError: GC overhead limit exceeded
2015-12-07 20:32:53,497 INFO [Thread-60]
amazon.emr.metrics.MetricsSaver: Saved 1:1 records to
/mnt/var/em/raw/i-782f08c8_20151207_7921_07921_raw.bin
2015-12-07 20:32:53,498 INFO [Thread-61]
amazon.emr.metrics.MetricsSaver: Saved 1:1 records to
/mnt/var/em/raw/i-782f08c8_20151207_7921_07921_raw.bin
2015-12-07 20:32:53,498 INFO [Thread-2]
org.apache.tez.dag.app.DAGAppMaster: DAGAppMaster received a signal.
Signaling TaskScheduler
2015-12-07 20:32:53,498 INFO [Thread-2]
org.apache.tez.dag.app.rm.TaskSchedulerEventHandler: TaskScheduler notified
that iSignalled was : true
2015-12-07 20:32:53,499 INFO [Thread-2]
org.apache.tez.dag.history.HistoryEventHandler: Stopping HistoryEventHandler
2015-12-07 20:32:53,499 INFO [Thread-2]
org.apache.tez.dag.history.recovery.RecoveryService: Stopping
RecoveryService
2015-12-07 20:32:53,499 INFO [Thread-2]
org.apache.tez.dag.history.recovery.RecoveryService: Closing Summary Stream
2015-12-07 20:32:53,499 INFO [LeaseRenewer:[email protected]:9000]
org.apache.hadoop.util.ExitUtil: Halt with status -1 Message: HaltException
Some specs about the EMR cluster - m1.xlarge master node, 4 r3.8xlarge
core nodes, 2 r3.8xlarge task nodes (about 1.3 TB memory)
I have tried the following settings but they don't work.
set tez.task.resource.memory.mb=8000;
SET hive.tez.container.size=30208;
SET hive.tez.java.opts=-Xmx24168m;
Can anyone please help on how to fix it or point me in right direction if I
am missing something.
