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https://issues.apache.org/jira/browse/TIKA-4831?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=18108807#comment-18108807
 ] 

ASF GitHub Bot commented on TIKA-4831:
--------------------------------------

dschmidt commented on code in PR #3044:
URL: https://github.com/apache/tika/pull/3044#discussion_r3871463552


##########
tika-parsers/tika-parsers-standard/tika-parsers-standard-modules/tika-parser-miscoffice-module/src/main/java/org/apache/tika/parser/geogebra/GeoGebraParser.java:
##########
@@ -0,0 +1,433 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements.  See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.tika.parser.geogebra;
+
+import java.io.IOException;
+import java.io.InputStream;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.Collections;
+import java.util.Enumeration;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.LinkedHashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
+
+import com.fasterxml.jackson.databind.JsonNode;
+import com.fasterxml.jackson.databind.ObjectMapper;
+import org.apache.commons.compress.archivers.zip.ZipArchiveEntry;
+import org.apache.commons.compress.archivers.zip.ZipFile;
+import org.xml.sax.ContentHandler;
+import org.xml.sax.SAXException;
+
+import org.apache.tika.annotation.TikaComponent;
+import org.apache.tika.exception.TikaException;
+import org.apache.tika.exception.WriteLimitReachedException;
+import org.apache.tika.extractor.EmbeddedDocumentExtractor;
+import org.apache.tika.extractor.EmbeddedDocumentUtil;
+import org.apache.tika.io.BoundedInputStream;
+import org.apache.tika.io.TikaInputStream;
+import org.apache.tika.metadata.HttpHeaders;
+import org.apache.tika.metadata.Metadata;
+import org.apache.tika.metadata.PageAnchoring;
+import org.apache.tika.metadata.PagedText;
+import org.apache.tika.metadata.Property;
+import org.apache.tika.metadata.TikaCoreProperties;
+import org.apache.tika.mime.MediaType;
+import org.apache.tika.parser.ParseContext;
+import org.apache.tika.parser.Parser;
+import org.apache.tika.sax.EmbeddedContentHandler;
+import org.apache.tika.sax.XHTMLContentHandler;
+import org.apache.tika.utils.XMLReaderUtils;
+import org.apache.tika.zip.utils.ZipFileHelper;
+
+/**
+ * Parser for the zip-based GeoGebra formats: worksheets (*.ggb), Notes/Slides
+ * (*.ggs) and tools (*.ggt).
+ * <p>
+ * The construction metadata (title, author, date) and the application
+ * name/version are read from {@code geogebra.xml} (or, for a tool, from
+ * {@code geogebra_macro.xml}), and the user-visible text (text objects, inline
+ * text, captions, tool names and help) is emitted as XHTML paragraphs. For
+ * Notes/Slides, each {@code _slideN/geogebra.xml} becomes a
+ * {@code <div class="slide">}, in the order given by {@code structure.json}.
+ * <p>
+ * The representative rendering of the document, {@code geogebra_thumbnail.png}
+ * at the root of a worksheet or tool, or the first available slide thumbnail
+ * of a Notes/Slides file, is emitted as an embedded document marked with
+ * {@link TikaCoreProperties.EmbeddedResourceType#THUMBNAIL}, so that clients
+ * (e.g. the unpacker's sidecar metadata) can pick it as the preview image.
+ * Thumbnails of the remaining slides are renderings of content that is already
+ * extracted, so they are skipped. The document script
+ * {@code geogebra_javascript.js} is emitted as a
+ * {@link TikaCoreProperties.EmbeddedResourceType#MACRO}, and any other
+ * embedded file (e.g. inserted pictures) as an embedded document.
+ * <p>
+ * A part that cannot be read (an unsupported zip entry, malformed XML) is
+ * recorded in the metadata and skipped; the remaining parts are still parsed.
+ */
+@TikaComponent(name = "geogebra-parser")
+public class GeoGebraParser implements Parser {
+
+    /**
+     * Serial version UID
+     */
+    private static final long serialVersionUID = 2114923339149498692L;
+
+    public static final String GEOGEBRA_PREFIX = "geogebra:";
+
+    /**
+     * The GeoGebra application flavor the file was written with,
+     * e.g. "classic", "notes", "graphing".
+     */
+    public static final Property APP_NAME =
+            Property.internalText(GEOGEBRA_PREFIX + "app-name");
+
+    /**
+     * The GeoGebra application version the file was written with.
+     */
+    public static final Property APP_VERSION =
+            Property.internalText(GEOGEBRA_PREFIX + "app-version");
+
+    /**
+     * The GeoGebra XML format version.
+     */
+    public static final Property FORMAT_VERSION =
+            Property.internalText(GEOGEBRA_PREFIX + "format-version");
+
+    /**
+     * The unique id GeoGebra assigns to the document.
+     */
+    public static final Property ID = Property.internalText(GEOGEBRA_PREFIX + 
"id");
+
+    /**
+     * The free-form date string of the construction. This is user-entered
+     * text, not necessarily a parseable date.
+     */
+    public static final Property DATE = Property.internalText(GEOGEBRA_PREFIX 
+ "date");
+
+    /**
+     * The tool names of the macros in a tool file (or in a worksheet with
+     * embedded macros). The name is the {@code toolName} attribute of the
+     * macro element.
+     */
+    public static final Property TOOL_NAME =
+            Property.internalTextBag(GEOGEBRA_PREFIX + "toolName");
+
+    private static final Set<MediaType> SUPPORTED_TYPES = 
Collections.unmodifiableSet(
+            new 
HashSet<>(Arrays.asList(MediaType.application("vnd.geogebra.file"),
+                    MediaType.application("vnd.geogebra.slides"),
+                    MediaType.application("vnd.geogebra.tool"))));
+
+    private static final String GEOGEBRA_XML = "geogebra.xml";
+    private static final String MACRO_XML = "geogebra_macro.xml";
+    private static final String STRUCTURE_JSON = "structure.json";
+    private static final String THUMBNAIL_PNG = "geogebra_thumbnail.png";
+    private static final String JAVASCRIPT_JS = "geogebra_javascript.js";
+
+    /**
+     * Housekeeping entries at the root or in a slide directory that carry no
+     * user content of their own. The XML files are parsed for text and the
+     * thumbnails handled separately.
+     */
+    private static final Set<String> HOUSEKEEPING_NAMES = 
Collections.unmodifiableSet(
+            new HashSet<>(Arrays.asList(GEOGEBRA_XML, MACRO_XML, THUMBNAIL_PNG,
+                    "geogebra_defaults2d.xml", "geogebra_defaults3d.xml")));
+
+    private static final String SLIDE_DIR_PREFIX = "_slide";
+
+    private static final Pattern SLIDE_XML_PATTERN =
+            Pattern.compile("^(" + SLIDE_DIR_PREFIX + "\\d+)/" + 
Pattern.quote(GEOGEBRA_XML) + "$");
+
+    /**
+     * structure.json only lists chapters, pages and element ids; a real one is
+     * a few kilobytes.
+     */
+    private static final long MAX_STRUCTURE_JSON_LENGTH = 1024 * 1024;
+
+    static final ObjectMapper OBJECT_MAPPER = new ObjectMapper();
+
+    @Override
+    public Set<MediaType> getSupportedTypes(ParseContext context) {
+        return SUPPORTED_TYPES;
+    }
+
+    @Override
+    public void parse(TikaInputStream tis, ContentHandler handler, Metadata 
metadata,
+                      ParseContext context) throws IOException, SAXException, 
TikaException {
+        EmbeddedDocumentExtractor embeddedDocumentExtractor =
+                EmbeddedDocumentUtil.getEmbeddedDocumentExtractor(context);
+
+        ZipFile zipFile;
+        Object container = tis.getOpenContainer();
+        if (container instanceof ZipFile) {
+            zipFile = (ZipFile) container;
+        } else {
+            zipFile = ZipFileHelper.open(tis, null);
+            tis.setOpenContainer(zipFile);
+        }
+
+        XHTMLContentHandler xhtml = new XHTMLContentHandler(handler, metadata, 
context);
+        xhtml.startDocument();
+        List<String> slideIds = getSlideIds(zipFile);
+        ZipArchiveEntry rootXml = zipFile.getEntry(GEOGEBRA_XML);
+        ZipArchiveEntry macroXml = zipFile.getEntry(MACRO_XML);
+        //document metadata comes from the first XML parsed: a worksheet's
+        //geogebra.xml, a tool's geogebra_macro.xml, or the first slide
+        boolean documentMetadataPending = true;
+        if (rootXml != null) {
+            documentMetadataPending = false;
+            parseGeoGebraXml(zipFile, rootXml, xhtml, metadata, true, context);
+        }
+        if (macroXml != null) {
+            //a worksheet with macros carries both XMLs; the macro one only
+            //contributes the tool names then, not the document metadata
+            parseGeoGebraXml(zipFile, macroXml, xhtml, metadata, 
documentMetadataPending, context);
+            documentMetadataPending = false;
+        }
+        Map<String, Integer> pageNumbers = new HashMap<>();
+        if (!slideIds.isEmpty()) {
+            metadata.set(PagedText.N_PAGES, slideIds.size());
+            int page = 1;
+            for (String slideId : slideIds) {
+                pageNumbers.put(slideId, page++);
+                xhtml.startElement("div", "class", "slide");
+                try {
+                    ZipArchiveEntry slideXml = zipFile.getEntry(slideId + "/" 
+ GEOGEBRA_XML);
+                    parseGeoGebraXml(zipFile, slideXml, xhtml, metadata, 
documentMetadataPending,
+                            context);
+                    documentMetadataPending = false;
+                } finally {
+                    xhtml.endElement("div");
+                }
+            }
+        }
+        handleThumbnail(zipFile, slideIds, xhtml, metadata, context, 
embeddedDocumentExtractor);
+        handleOtherEntries(zipFile, pageNumbers, xhtml, metadata, context,
+                embeddedDocumentExtractor);
+        xhtml.endDocument();

Review Comment:
   tis.setOpenContainer registers the ZipFile as a closeable resource of the 
TikaInputStream, so it is closed with the stream; this is the same lifecycle 
ZipParser and OpenDocumentParser use.



##########
tika-parsers/tika-parsers-standard/tika-parsers-standard-modules/tika-parser-zip-commons/src/test/java/org/apache/tika/detect/zip/GeoGebraDetectionTest.java:
##########
@@ -0,0 +1,66 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements.  See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.tika.detect.zip;
+
+import static org.junit.jupiter.api.Assertions.assertEquals;
+
+import java.util.List;
+
+import org.junit.jupiter.api.Test;
+
+import org.apache.tika.TikaTest;
+import org.apache.tika.io.TikaInputStream;
+import org.apache.tika.metadata.HttpHeaders;
+import org.apache.tika.metadata.Metadata;
+import org.apache.tika.parser.ParseContext;
+
+/**
+ * Test case for detecting the zip-based GeoGebra formats by their contents.
+ * The streams are parsed without a resource name, so detection must rely on
+ * the zip entry names, not the *.ggb/*.ggs/*.ggt globs.
+ */
+public class GeoGebraDetectionTest extends TikaTest {
+
+    private List<Metadata> getRecursiveMetadataWithoutName(String fileName) 
throws Exception {
+        try (TikaInputStream tis = TikaInputStream.get(
+                getClass().getResourceAsStream("/test-documents/" + fileName), 
new Metadata())) {
+            return getRecursiveMetadata(tis, AUTO_DETECT_PARSER, new 
Metadata(),
+                    new ParseContext(), true);

Review Comment:
   Fixed: the test now asserts the resource exists with a clear message.





> Add content-based detection and a parser for GeoGebra files (ggb, ggs, ggt)
> ---------------------------------------------------------------------------
>
>                 Key: TIKA-4831
>                 URL: https://issues.apache.org/jira/browse/TIKA-4831
>             Project: Tika
>          Issue Type: New Feature
>            Reporter: Dominik Schmidt
>            Priority: Major
>
> GeoGebra files are currently only recognized by file extension. The mime
> registry has glob-only entries for {{application/vnd.geogebra.file}} 
> ({{*.ggb}})
> and {{application/vnd.geogebra.tool}} ({{*.ggt}}), but both formats are zip
> containers and the entries are not declared as sub-classes of
> {{application/zip}}. As a result, as soon as content is available, magic
> detection returns {{application/zip}} and the filename hint is discarded in
> {{MimeTypes.applyHint()}} - even when the resource name is known. Content-only
> detection (no filename) has no way to identify the formats at all, and the
> newer GeoGebra formats {{*.ggs}} (Notes/Slides) and {{*.ggp}} (Pinboard) are
> missing from the registry entirely.
> There is also no parser for any of the GeoGebra formats: files fall through to
> the generic {{PackageParser}}, which extracts the zip entries but produces no
> document metadata and no usable text (the {{geogebra.xml}} construction is
> emitted as raw XML through the XML parser).
> Proposed improvement:
> * mime registry: declare {{application/vnd.geogebra.file}} and
>   {{application/vnd.geogebra.tool}} as {{sub-class-of application/zip}}; add
>   {{application/vnd.geogebra.slides}} ({{*.ggs}}, zip-based) and
>   {{application/vnd.geogebra.pinboard}} ({{*.ggp}}, JSON-based)
> * a {{ZipContainerDetector}} that identifies the formats without a filename by
>   their well-known entries: {{geogebra.xml}} (worksheet), {{structure.json}}
>   plus {{_slideN/geogebra.xml}} (Notes/Slides), {{geogebra_macro.xml}} (tool);
>   a worksheet with macros contains both {{geogebra.xml}} and
>   {{geogebra_macro.xml}}, so the decision must be made after all entry names
>   have been seen
> * a {{GeoGebraParser}} for ggb/ggs/ggt that extracts the construction metadata
>   (title, author, date) and application name/version, emits the user-visible
>   text (text objects, rich-text notes, captions, macro names/help) as XHTML,
>   and emits the embedded {{geogebra_thumbnail.png}} (root, or the first 
> slide's
>   for Notes/Slides) as an embedded document marked
>   {{embeddedResourceType=THUMBNAIL}}, following the existing convention in the
>   OOXML, ODF and iWork parsers, so downstream consumers of {{/unpack/all}}
>   sidecars can identify the preview image
> Use case: file sync/share servers (e.g. OpenCloud) use Tika for content
> extraction and for serving embedded preview images; with the THUMBNAIL marker
> they can select the representative preview of a GeoGebra file the same way as
> for Office documents.
> Pull request to follow.



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