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https://issues.apache.org/jira/browse/UIMA-4480?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14638817#comment-14638817
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Peter Klügl commented on UIMA-4480:
-----------------------------------
It's not related to the missing JCas class for that type. The type system used
to create the CAS is the problem. If you use the classpath scanning
functionality of uimaFIT, then you need to include the generated type system in
the lookup (types.txt), or you follow the code snippet I mentioned that merges
the type systems.
btw, how did you create that engine descriptor? It's not valid, e.g., no Ruta
component would create one without mainScript.
> Cannot declar new type in Java code to apply Ruta rules
> -------------------------------------------------------
>
> Key: UIMA-4480
> URL: https://issues.apache.org/jira/browse/UIMA-4480
> Project: UIMA
> Issue Type: Bug
> Components: ruta
> Affects Versions: 2.2.1ruta
> Reporter: Min Jiang
> Assignee: Peter Klügl
> Fix For: 2.3.1ruta
>
>
> I used Java code to apply UIMA Ruta rules, but with declare statement, ruta
> cannot recognize the new created annotation type.
> Here is the code I used:
> String rutaStr2 = "DECLARE person; W{REGEXP(\"Patient\") -> MARK(person)};";
> Ruta.apply( aJCas.getCas(), rutaStr2 );
> The error is like:
> Jun 24, 2015 3:01:07 PM
> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl
> callAnalysisComponentProcess(417)
> SEVERE: Exception occurred
> org.apache.uima.analysis_engine.AnalysisEngineProcessException: Annotator
> processing failed.
> at org.apache.uima.ruta.engine.RutaEngine.process(RutaEngine.java:496)
> at
> org.apache.uima.analysis_component.JCasAnnotator_ImplBase.process(JCasAnnotator_ImplBase.java:48)
> at
> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.callAnalysisComponentProcess(PrimitiveAnalysisEngine_impl.java:385)
> at
> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.processAndOutputNewCASes(PrimitiveAnalysisEngine_impl.java:309)
> at
> org.apache.uima.analysis_engine.impl.AnalysisEngineImplBase.process(AnalysisEngineImplBase.java:267)
> at org.apache.uima.ruta.engine.Ruta.apply(Ruta.java:75)
> at org.apache.uima.ruta.engine.Ruta.apply(Ruta.java:83)
> at
> edu.uth.clamp.nlp.attr.ast.LinearAssertion.main(LinearAssertion.java:610)
> Caused by: java.lang.IllegalArgumentException: Not able to resolve type:
> animal
> at
> org.apache.uima.ruta.expression.type.SimpleTypeExpression.getType(SimpleTypeExpression.java:47)
> at
> org.apache.uima.ruta.action.AbstractMarkAction.createAnnotation(AbstractMarkAction.java:42)
> at org.apache.uima.ruta.action.MarkAction.execute(MarkAction.java:57)
> at
> org.apache.uima.ruta.rule.AbstractRuleElement.apply(AbstractRuleElement.java:130)
> at
> org.apache.uima.ruta.rule.RuleElementCaretaker.applyRuleElements(RuleElementCaretaker.java:111)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.applyRuleElements(ComposedRuleElement.java:559)
> at
> org.apache.uima.ruta.rule.AbstractRuleElement.doneMatching(AbstractRuleElement.java:84)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.fallback(ComposedRuleElement.java:480)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.fallbackContinue(ComposedRuleElement.java:384)
> at
> org.apache.uima.ruta.rule.RutaRuleElement.startMatch(RutaRuleElement.java:106)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.startMatch(ComposedRuleElement.java:73)
> at org.apache.uima.ruta.rule.RutaRule.apply(RutaRule.java:47)
> at org.apache.uima.ruta.rule.RutaRule.apply(RutaRule.java:40)
> at org.apache.uima.ruta.rule.RutaRule.apply(RutaRule.java:29)
> at org.apache.uima.ruta.RutaScriptBlock.apply(RutaScriptBlock.java:63)
> at org.apache.uima.ruta.RutaModule.apply(RutaModule.java:48)
> at org.apache.uima.ruta.engine.RutaEngine.process(RutaEngine.java:494)
> ... 7 more
> org.apache.uima.analysis_engine.AnalysisEngineProcessException: Annotator
> processing failed.
> at org.apache.uima.ruta.engine.RutaEngine.process(RutaEngine.java:496)
> at
> org.apache.uima.analysis_component.JCasAnnotator_ImplBase.process(JCasAnnotator_ImplBase.java:48)
> at
> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.callAnalysisComponentProcess(PrimitiveAnalysisEngine_impl.java:385)
> at
> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.processAndOutputNewCASes(PrimitiveAnalysisEngine_impl.java:309)
> at
> org.apache.uima.analysis_engine.impl.AnalysisEngineImplBase.process(AnalysisEngineImplBase.java:267)
> at org.apache.uima.ruta.engine.Ruta.apply(Ruta.java:75)
> at org.apache.uima.ruta.engine.Ruta.apply(Ruta.java:83)
> at
> edu.uth.clamp.nlp.attr.ast.LinearAssertion.main(LinearAssertion.java:610)
> Caused by: java.lang.IllegalArgumentException: Not able to resolve type:
> animal
> at
> org.apache.uima.ruta.expression.type.SimpleTypeExpression.getType(SimpleTypeExpression.java:47)
> at
> org.apache.uima.ruta.action.AbstractMarkAction.createAnnotation(AbstractMarkAction.java:42)
> at org.apache.uima.ruta.action.MarkAction.execute(MarkAction.java:57)
> at
> org.apache.uima.ruta.rule.AbstractRuleElement.apply(AbstractRuleElement.java:130)
> at
> org.apache.uima.ruta.rule.RuleElementCaretaker.applyRuleElements(RuleElementCaretaker.java:111)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.applyRuleElements(ComposedRuleElement.java:559)
> at
> org.apache.uima.ruta.rule.AbstractRuleElement.doneMatching(AbstractRuleElement.java:84)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.fallback(ComposedRuleElement.java:480)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.fallbackContinue(ComposedRuleElement.java:384)
> at
> org.apache.uima.ruta.rule.RutaRuleElement.startMatch(RutaRuleElement.java:106)
> at
> org.apache.uima.ruta.rule.ComposedRuleElement.startMatch(ComposedRuleElement.java:73)
> at org.apache.uima.ruta.rule.RutaRule.apply(RutaRule.java:47)
> at org.apache.uima.ruta.rule.RutaRule.apply(RutaRule.java:40)
> at org.apache.uima.ruta.rule.RutaRule.apply(RutaRule.java:29)
> at org.apache.uima.ruta.RutaScriptBlock.apply(RutaScriptBlock.java:63)
> at org.apache.uima.ruta.RutaModule.apply(RutaModule.java:48)
> at org.apache.uima.ruta.engine.RutaEngine.process(RutaEngine.java:494)
> ... 7 more
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