lework created ZEPPELIN-1998:
--------------------------------
Summary: zeppelin spark on yarn mode,
java.lang.ClassNotFoundException
Key: ZEPPELIN-1998
URL: https://issues.apache.org/jira/browse/ZEPPELIN-1998
Project: Zeppelin
Issue Type: Bug
Components: Interpreters
Affects Versions: 0.6.1
Environment: export MASTER=yarn-client
export HADOOP_CONF_DIR=/etc/hadoop/conf
export SPARK_HOME=/opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/lib/spark
export HBASE_HOME=/opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/lib/hbase
export
HADOOP_HOME=/opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/bin/../lib/hadoop
Reporter: lework
Priority: Blocker
version:
cdh: 5.9.0
spark:1.6
zeppelin: 0.6.1
build option:
mvn clean package -Pbuild-distr -Pyarn -Pspark-1.6 -Dspark.version=1.6.0
-Phadoop-2.6.0 -Dhadoop.version=2.6.0-cdh5.9.0 -Ppyspark -Psparkr
-Dhbase.hbase.version=1.2.0 -Dhbase.hadoop.version=2.6.0 -Pvendor-repo
-DskipTests
zeppelin notebook:
%spark
sc.version
sc.getConf.get("spark.home")
System.getenv().get("PYTHONPATH")
System.getenv().get("SPARK_HOME")
val threshold = "book1"
val products = Seq("book1", "book2", "book3", "book4")
val rdd = sc.makeRDD(products,2)
val result = rdd.filter{ p =>
p.equals(threshold)
}.count()
println("!!!!!!!!!!!!!!================result=" + result)
output:
res0: String = 1.6.0
res1: String = /opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/lib/spark
res2: String =
/opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/lib/spark/python/lib/py4j-0.9-src.zip:/opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/lib/spark/python/:
res3: String = /opt/cloudera/parcels/CDH-5.9.0-1.cdh5.9.0.p0.23/lib/spark
threshold: String = book1
products: Seq[String] = List(book1, book2, book3, book4)
rdd: org.apache.spark.rdd.RDD[String] = ParallelCollectionRDD[0] at makeRDD at
<console>:31
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in
stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID
6, node5, executor 1): java.lang.ClassNotFoundException:
$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$anonfun$1
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:274)
at
org.apache.spark.serializer.JavaDeserializationStream$$anon$1.resolveClass(JavaSerializer.scala:68)
at
java.io.ObjectInputStream.readNonProxyDesc(ObjectInputStream.java:1612)
at java.io.ObjectInputStream.readClassDesc(ObjectInputStream.java:1517)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1771)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at
java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at
java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at
java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:370)
at
org.apache.spark.serializer.JavaDeserializationStream.readObject(JavaSerializer.scala:76)
at
org.apache.spark.serializer.JavaSerializerInstance.deserialize(JavaSerializer.scala:115)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:61)
at org.apache.spark.scheduler.Task.run(Task.scala:89)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:229)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
Driver stacktrace:
at
org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1431)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1419)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1418)
at
scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
at
org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1418)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799)
at scala.Option.foreach(Option.scala:236)
at
org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:799)
at
org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1642)
at
org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1601)
at
org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1590)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
at
org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:620)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1844)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1857)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1870)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:1941)
at org.apache.spark.rdd.RDD.count(RDD.scala:1157)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:37)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:42)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:44)
at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:46)
at $iwC$$iwC$$iwC$$iwC.<init>(<console>:48)
at $iwC$$iwC$$iwC.<init>(<console>:50)
at $iwC$$iwC.<init>(<console>:52)
at $iwC.<init>(<console>:54)
at <init>(<console>:56)
at .<init>(<console>:60)
at .<clinit>(<console>)
at .<init>(<console>:7)
at .<clinit>(<console>)
at $print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at
org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1045)
at
org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1326)
at
org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:821)
at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:852)
at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:800)
at sun.reflect.GeneratedMethodAccessor10.invoke(Unknown Source)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.zeppelin.spark.Utils.invokeMethod(Utils.java:38)
at
org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:878)
at
org.apache.zeppelin.spark.SparkInterpreter.interpretInput(SparkInterpreter.java:1093)
at
org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:1036)
at
org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:1029)
at
org.apache.zeppelin.interpreter.LazyOpenInterpreter.interpret(LazyOpenInterpreter.java:94)
at
org.apache.zeppelin.interpreter.remote.RemoteInterpreterServer$InterpretJob.jobRun(RemoteInterpreterServer.java:341)
at org.apache.zeppelin.scheduler.Job.run(Job.java:176)
at
org.apache.zeppelin.scheduler.FIFOScheduler$1.run(FIFOScheduler.java:139)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at
java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:178)
at
java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:292)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.ClassNotFoundException:
$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$anonfun$1
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:274)
at
org.apache.spark.serializer.JavaDeserializationStream$$anon$1.resolveClass(JavaSerializer.scala:68)
at
java.io.ObjectInputStream.readNonProxyDesc(ObjectInputStream.java:1612)
at java.io.ObjectInputStream.readClassDesc(ObjectInputStream.java:1517)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1771)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at
java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
at j
ava.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at
java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at
java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:1990)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1915)
at
java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1798)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1350)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:370)
at
org.apache.spark.serializer.JavaDeserializationStream.readObject(JavaSerializer.scala:76)
at
org.apache.spark.serializer.JavaSerializerInstance.deserialize(JavaSerializer.scala:115)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:61)
at org.apache.spark.scheduler.Task.run(Task.scala:89)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:229)
... 3 more
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