Hmm, not good. So we have a situation where it is sometimes better to include the HCA when it is the only rdma btl. Will have a new version up in a bit that adds an MCA parameter to control the behavior. The default will be the same as 1.10.x.
-Nathan > On Aug 8, 2016, at 4:51 PM, tmish...@jcity.maeda.co.jp wrote: > > Hi, unfortunately it doesn't work well. The previous one was much > better ... > > [mishima@manage OMB-3.1.1-openmpi2.0.0]$ mpirun -np 2 -report-bindings > osu_bw > [manage.cluster:25107] MCW rank 0 bound to socket 0[core 0[hwt 0]], socket > 0[core 1[hwt 0]], socket 0[core 2[hwt 0]], so > cket 0[core 3[hwt 0]], socket 0[core 4[hwt 0]], socket 0[core 5[hwt 0]]: > [B/B/B/B/B/B][./././././.] > [manage.cluster:25107] MCW rank 1 bound to socket 0[core 0[hwt 0]], socket > 0[core 1[hwt 0]], socket 0[core 2[hwt 0]], so > cket 0[core 3[hwt 0]], socket 0[core 4[hwt 0]], socket 0[core 5[hwt 0]]: > [B/B/B/B/B/B][./././././.] > # OSU MPI Bandwidth Test v3.1.1 > # Size Bandwidth (MB/s) > 1 2.22 > 2 4.53 > 4 9.11 > 8 18.02 > 16 35.44 > 32 70.84 > 64 113.71 > 128 176.74 > 256 311.07 > 512 529.03 > 1024 907.83 > 2048 1597.66 > 4096 330.14 > 8192 516.49 > 16384 780.31 > 32768 1038.43 > 65536 1186.36 > 131072 1268.87 > 262144 1222.24 > 524288 1232.30 > 1048576 1244.62 > 2097152 1260.25 > 4194304 1263.47 > > Tetsuya > > > 2016/08/09 2:42:24、"devel"さんは「Re: [OMPI devel] sm BTL performace of > the openmpi-2.0.0」で書きました >> Ok, there was a problem with the selection logic when only one rdma > capable btl is available. I changed the logic to always use the RDMA btl > over pipelined send/recv. This works better for me on a >> Intel Omnipath system. Let me know if this works for you. >> >> > https://github.com/hjelmn/ompi/commit/dddb865b5337213fd73d0e226b02e2f049cfab47.patch > >> >> -Nathan >> >> On Aug 07, 2016, at 10:00 PM, tmish...@jcity.maeda.co.jp wrote: >> >> Hi, here is the gdb output for additional information: >> >> (It might be inexact, because I built openmpi-2.0.0 without debug option) >> >> Core was generated by `osu_bw'. >> Program terminated with signal 11, Segmentation fault. >> #0 0x00000031d9008806 in ?? () from /lib64/libgcc_s.so.1 >> (gdb) where >> #0 0x00000031d9008806 in ?? () from /lib64/libgcc_s.so.1 >> #1 0x00000031d9008934 in _Unwind_Backtrace () from /lib64/libgcc_s.so.1 >> #2 0x00000037ab8e5ee8 in backtrace () from /lib64/libc.so.6 >> #3 0x00002ad882bd4345 in opal_backtrace_print () >> at ./backtrace_execinfo.c:47 >> #4 0x00002ad882bd1180 in show_stackframe () at ./stacktrace.c:331 >> #5 <signal handler called> >> #6 mca_pml_ob1_recv_request_schedule_once () at ./pml_ob1_recvreq.c:983 >> #7 0x00002aaab412f47a in mca_pml_ob1_recv_request_progress_rndv () >> >> > from /home/mishima/opt/mpi/openmpi-2.0.0-pgi16.5/lib/openmpi/mca_pml_ob1.so >> #8 0x00002aaab412c645 in mca_pml_ob1_recv_frag_match () >> at ./pml_ob1_recvfrag.c:715 >> #9 0x00002aaab412bba6 in mca_pml_ob1_recv_frag_callback_rndv () >> at ./pml_ob1_recvfrag.c:267 >> #10 0x00002aaaaf2748d3 in mca_btl_vader_poll_handle_frag () >> at ./btl_vader_component.c:589 >> #11 0x00002aaaaf274b9a in mca_btl_vader_component_progress () >> at ./btl_vader_component.c:231 >> #12 0x00002ad882b916fc in opal_progress () at runtime/opal_progress.c:224 >> #13 0x00002ad8820a9aa5 in ompi_request_default_wait_all () at >> request/req_wait.c:77 >> #14 0x00002ad8820f10dd in PMPI_Waitall () at ./pwaitall.c:76 >> #15 0x0000000000401108 in main () at ./osu_bw.c:144 >> >> Tetsuya >> >> >> 2016/08/08 12:34:57、"devel"さんは「Re: [OMPI devel] sm BTL performace of >> the openmpi-2.0.0」で書きました >> Hi, it caused segfault as below: >> [manage.cluster:25436] MCW rank 0 bound to socket 0[core 0[hwt 0]],socket >> 0[core 1[hwt 0]], socket 0[core 2[hwt 0]], socket 0[core 3[hwt 0]], > socket 0[core 4[hwt 0]], socket 0[core 5[hwt > 0]]:[B/B/B/B/B/B][./././././.][manage.cluster:25436] MCW rank 1 bound to > socket 0[core >> 0[hwt 0]],socket >> 0[core 1[hwt 0]], socket 0[core 2[hwt 0]], socket 0[core 3[hwt 0]], > socket 0[core 4[hwt 0]], socket 0[core 5[hwt > 0]]:[B/B/B/B/B/B][./././././.]# OSU MPI Bandwidth Test v3.1.1# Size > Bandwidth (MB/s)1 >> 2.232 4.514 8.998 17.8316 35.1832 69.6664 109.84128 179.65256 303.52512 > 532.811024 911.742048 1605.294096 1598.738192 2135.9416384 2468.9832768 > 2818.3765536 3658.83131072 4200.50262144 4545.01524288 >> 4757.841048576 4831.75[manage:25442] *** Process received signal > ***[manage:25442] Signal: Segmentation fault (11)[manage:25442] Signal > code: Address not mapped (1)[manage:25442] Failing at address: >> 0x8 >> > -------------------------------------------------------------------------- >> mpirun noticed that process rank 1 with PID 0 on node manage exited > onsignal 11 (Segmentation fault). >> > -------------------------------------------------------------------------- >> >> Tetsuya Mishima >> >> 2016/08/08 10:12:05、"devel"さんは「Re: [OMPI devel] sm BTL performace > ofthe openmpi-2.0.0」で書きました> This patch also modifies the put path. > Let me know if this works:>> diff --git >> a/ompi/mca/pml/ob1/pml_ob1_rdma.cb/ompi/mca/pml/ob1/pml_ob1_rdma.c> index > 888e126..a3ec6f8 100644> --- a/ompi/mca/pml/ob1/pml_ob1_rdma.c> +++ > b/ompi/mca/pml/ob1/pml_ob1_rdma.c> @@ -42,6 +42,7 @@ >> size_t mca_pml_ob1_rdma_btls(> mca_pml_ob1_com_btl_t* rdma_btls)> {> int > num_btls = mca_bml_base_btl_array_get_size(&bml_endpoint->btl_rdma); >>> + int num_eager_btls = mca_bml_base_btl_array_get_size(&bml_endpoint-> > btl_eager);> double weight_total = 0;> int num_btls_used = 0;>> @@ -57,6 > +58,21 @@ size_t mca_pml_ob1_rdma_btls(> >> (bml_endpoint->btl_rdma_index + n) % num_btls);> > mca_btl_base_registration_handle_t *reg_handle = NULL;> > mca_btl_base_module_t *btl = bml_btl->btl;> + bool ignore = true;> +> + /* > do not use rdma >> btls that are not in the eager list. thisis >> necessary to avoid using> + * btls that exist on the endpoint only to > support RMA. */> + for (int i = 0 ; i < num_eager_btls ; ++i) {> + > mca_bml_base_btl_t *eager_btl >> =mca_bml_base_btl_array_get_index (&bml_endpoint->btl_eager, i);> + if > (eager_btl->btl_endpoint == bml_btl->btl_endpoint) {> + ignore = false;> + > break;> + }> + }> +> + if (ignore) {> + continue;> + >> }>> if (btl->btl_register_mem) {> /* do not use the RDMA protocol with > this btl if 1) leave pinned isdisabled,> @@ -99,18 +115,34 @@ size_t > mca_pml_ob1_rdma_pipeline_btls( mca_bml_base_endpoint_t* >> bml_endpoint,> size_t size,> mca_pml_ob1_com_btl_t* rdma_btls )> {> - int > i, num_btls = mca_bml_base_btl_array_get_size(&bml_endpoint->btl_rdma);> + > int num_btls = mca_bml_base_btl_array_get_size >> (&bml_endpoint->btl_rdma);> + int num_eager_btls = > mca_bml_base_btl_array_get_size(&bml_endpoint->btl_eager);> double > weight_total = 0;> + int rdma_count = 0;>> - for(i = 0; i < num_btls && i < > >> mca_pml_ob1.max_rdma_per_request; i+ >> +) {> - rdma_btls[i].bml_btl => - mca_bml_base_btl_array_get_next > (&bml_endpoint->btl_rdma);> - rdma_btls[i].btl_reg = NULL;> + for(int i = > 0; i < num_btls && i <mca_pml_ob1.max_rdma_per_request; >> i++) {> + mca_bml_base_btl_t *bml_btl = mca_bml_base_btl_array_get_next > (&bml_endpoint->btl_rdma);> + bool ignore = true;> +> + for (int i = 0 ; i > < num_eager_btls ; ++i) {> + mca_bml_base_btl_t >> *eager_btl =mca_bml_base_btl_array_get_index (&bml_endpoint->btl_eager, > i);> + if (eager_btl->btl_endpoint == bml_btl->btl_endpoint) {> + ignore = > false;> + break;> + }> + }>> - weight_total += >> rdma_btls[i].bml_btl->btl_weight;> + if (ignore) {> + continue;> + }> +> > + rdma_btls[rdma_count].bml_btl = bml_btl;> + rdma_btls[rdma_count+ > +].btl_reg = NULL;> +> + weight_total += >> bml_btl->btl_weight;> }>> - mca_pml_ob1_calc_weighted_length(rdma_btls, > i, size,weight_total); >>> + mca_pml_ob1_calc_weighted_length (rdma_btls, rdma_count, > size,weight_total);>> - return i;> + return rdma_count;> }>>>>> > On Aug 7, > 2016, at 6:51 PM, Nathan Hjelm <hje...@me.com> wrote:> >> > >> Looks like the put path probably needs a similar patch. Will sendanother > patch soon.> >> >> On Aug 7, 2016, at 6:01 PM, tmish...@jcity.maeda.co.jp > wrote:> >>> >> Hi,> >>> >> I applied the patch to >> the file "pml_ob1_rdma.c" and ran osu_bwagain. >>>>> Then, I still see the bad performance for larger size(>=2097152 ).> >>>>>> [mishima@manage OMB-3.1.1-openmpi2.0.0]$ mpirun -np > 2-report-bindings >>>>> osu_bw> >> [manage.cluster:27444] MCW rank 0 bound to socket 0[core > 0[hwt 0]],socket> >> 0[core 1[hwt 0]], socket 0[core 2[hwt 0]], so> >> cket > 0[core 3[hwt 0]], socket 0[core 4[hwt 0]], socket >> 0[core 5[hwt0]]:> >> [B/B/B/B/B/B][./././././.]> >> > [manage.cluster:27444] MCW rank 1 bound to socket 0[core 0[hwt 0]],socket> >>> 0[core 1[hwt 0]], socket 0[core 2[hwt 0]], so> >> cket 0[core 3[hwt >> 0]], socket 0[core 4[hwt 0]], socket 0[core 5[hwt0]]:> >> > [B/B/B/B/B/B][./././././.]> >> # OSU MPI Bandwidth Test v3.1.1> >> # Size > Bandwidth (MB/s)> >> 1 2.23> >> 2 4.52> >> 4 8.82> >> 8 17.83> >> >> 16 35.31> >> 32 69.49> >> 64 109.46> >> 128 178.51> >> 256 307.68> >> 512 > 532.64> >> 1024 909.34> >> 2048 1583.95> >> 4096 1554.74> >> 8192 2120.31> >>> 16384 2489.79> >> 32768 2853.66> >> 65536 >> 3692.82> >> 131072 4236.67> >> 262144 4575.63> >> 524288 4778.47> >> > 1048576 4839.34> >> 2097152 2231.46> >> 4194304 1505.48> >>> >> Regards,> >>>>>> Tetsuya Mishima> >>> >> 2016/08/06 0:00:08、" >> devel"さんは「Re: [OMPI devel] sm BTLperformace >> of> >> the openmpi-2.0.0」で書きました> >>> Making ob1 ignore RDMA btls > that are not in use for eager messagesmight> >> be sufficient. Please try > the following patch and let me know if itworks> >> for you.> >>>>>>>>> diff --git a/ompi/mca/pml/ob1/pml_ob1_rdma.c> >> > b/ompi/mca/pml/ob1/pml_ob1_rdma.c> >>> index 888e126..0c99525 100644> >>> > --- a/ompi/mca/pml/ob1/pml_ob1_rdma.c> >>> +++ >> b/ompi/mca/pml/ob1/pml_ob1_rdma.c> >>> @@ -42,6 +42,7 @@ size_t > mca_pml_ob1_rdma_btls(> >>> mca_pml_ob1_com_btl_t* rdma_btls)> >>> {> >>> > int num_btls = >> mca_bml_base_btl_array_get_size(&bml_endpoint->btl_rdma);> >>> + int > num_eager_btls = mca_bml_base_btl_array_get_size> >> (&bml_endpoint-> > btl_eager);> >>> double weight_total = 0;> >>> int >> num_btls_used = 0;> >>>> >>> @@ -57,6 +58,21 @@ size_t > mca_pml_ob1_rdma_btls(> >>> (bml_endpoint->btl_rdma_index + n) % > num_btls);> >>> mca_btl_base_registration_handle_t *reg_handle = NULL;> >>> > >> mca_btl_base_module_t *btl = bml_btl->btl;> >>> + bool ignore = true;> >>>> +> >>> + /* do not use rdma btls that are not in the eager list.this >> is> >> necessary to avoid using> >>> + * btls that exist on the endpoint > only to support RMA. */> >>> + for (int i = 0 ; i < num_eager_btls ; ++i) > {> >>> + mca_bml_base_btl_t *eager_btl => >> >> mca_bml_base_btl_array_get_index (&bml_endpoint->btl_eager, i);> >>> + if > (eager_btl->btl_endpoint == bml_btl->btl_endpoint){ >>>>>> + ignore = false;> >>> + break;> >>> + }> >>> + }> >>> +> >>> + if > (ignore) {> >>> + continue;> >>> + }> >>>> >>> if (btl->btl_register_mem) > {> >>> /* do not use the RDMA protocol with this btl >> if 1) leave pinned is> >> disabled,> >>>> >>>> >>>> >>> -Nathan> >>>> >>>>>>>>> On Aug 5, 2016, at 8:44 AM, Nathan Hjelm <hje...@me.com> wrote:> >>>>>>>>>> Nope. We are not going to change the flags >> as this will disablethe >> blt> >> for one-sided. Not sure what is going on here as the openib > btlshould >> be> >> 1) not used for pt2pt, and 2) polled infrequently.> >>> The btl > debug log suggests both of these are the case. Not surewhat >> is> >> going on yet.> >>>>> >>>> -Nathan> >>>>> >>>>> On Aug 5, 2016, at > 8:16 AM, r...@open-mpi.org wrote:> >>>>>> >>>>> Perhaps those flags need to > be the default?> >>>>>> >>>>>> >>>>>> On Aug 5, >> 2016, at 7:14 AM, tmish...@jcity.maeda.co.jp wrote:> >>>>>>> >>>>>> Hi > Christoph,> >>>>>>> >>>>>> I applied the commits - pull/#1250 as Nathan > told me and added"-mca> >>>>>> btl_openib_flags 311" to >> the mpirun command line option, then it> >> worked for> >>>>>> me. I > don't know the reason, but it looks ATOMIC_FOP in the> >>>>>> > btl_openib_flags degrades the sm/vader perfomance.> >>>>>>> >>>>>> >> Regards,> >>>>>> Tetsuya Mishima> >>>>>>> >>>>>>> >>>>>> 2016/08/05 > 22:10:37、"devel"さんは「Re: [OMPI devel] sm BTL> >> performace of> >>>>>> > the openmpi-2.0.0」で書きました> >>>>>>> Hello,> >>>>>>>> >>>>>>> We >> see the same problem here on various machines with Open MPI> >> 2.0.0.> >>>>>>>> To us it seems that enabling the openib btl triggers > badperformance> >> for> >>>>>> the sm AND vader btls!> >>>>>>> >> --mca btl_base_verbose 10 reports in both cases the correct useof> >> sm > and> >>>>>> vader between MPI ranks - only performance differs?!> >>>>>>>> >>>>>>>> One irritating thing I see in the log >> output is the following:> >>>>>>> openib BTL: rdmacm CPC unavailable for > use on mlx4_0:1; skipped> >>>>>>> [rank=1] openib: using port mlx4_0:1> >>>>>>>> select: init of component openib returned >> success> >>>>>>>> >>>>>>> Did not look into the "Skipped" code part > yet, ...> >>>>>>>> >>>>>>> Results see below.> >>>>>>>> >>>>>>> Best > regards> >>>>>>> Christoph Niethammer> >>>>>>>> >>>>>>> --> >>>>>>>>>>>>>>>>> Christoph Niethammer> >>>>>>> High Performance Computing > Center Stuttgart (HLRS)> >>>>>>> Nobelstrasse 19> >>>>>>> 70569 Stuttgart> >>>>>>>>>>>>>>>> Tel: ++49(0)711-685-87203> >>>>>>>>> email: nietham...@hlrs.de> >>>>>>> > http://www.hlrs.de/people/niethammer> >>>>>>>> >>>>>>>> >>>>>>>> >>>>>>> > mpirun -np 2 --mca btl self,vader osu_bw> >>>>>>> # OSU MPI Bandwidth Test> >>>>>>>> >> # Size Bandwidth (MB/s)> >>>>>>> 1 4.83> >>>>>>> 2 10.30> >>>>>>> 4 > 24.68> >>>>>>> 8 49.27> >>>>>>> 16 95.80> >>>>>>> 32 187.52> >>>>>>> 64 > 270.82> >>>>>>> 128 405.00> >>>>>>> 256 659.26> >>>>>>> 512 >> 1165.14> >>>>>>> 1024 2372.83> >>>>>>> 2048 3592.85> >>>>>>> 4096 > 4283.51> >>>>>>> 8192 5523.55> >>>>>>> 16384 7388.92> >>>>>>> 32768 > 7024.37> >>>>>>> 65536 7353.79> >>>>>>> 131072 7465.96> >>>>>>> >> 262144 8597.56> >>>>>>> 524288 9292.86> >>>>>>> 1048576 9168.01> >>>>>>> > 2097152 9009.62> >>>>>>> 4194304 9013.02> >>>>>>>> >>>>>>> mpirun -np 2 > --mca btl self,vader,openib osu_bw> >>>>>>> # OSU MPI >> Bandwidth Test> >>>>>>> # Size Bandwidth (MB/s)> >>>>>>> 1 5.32> >>>>>>> > 2 11.14> >>>>>>> 4 20.88> >>>>>>> 8 49.26> >>>>>>> 16 99.11> >>>>>>> 32 > 197.42> >>>>>>> 64 301.08> >>>>>>> 128 413.64> >>>>>>> >> 256 651.15> >>>>>>> 512 1161.12> >>>>>>> 1024 2460.99> >>>>>>> 2048 > 3627.36> >>>>>>> 4096 2191.06> >>>>>>> 8192 3118.36> >>>>>>> 16384 3428.45> >>>>>>>> 32768 3676.96> >>>>>>> 65536 3709.65> >>>>>>> >> 131072 3748.64> >>>>>>> 262144 3764.88> >>>>>>> 524288 3764.61> >>>>>>> > 1048576 3772.45> >>>>>>> 2097152 3757.37> >>>>>>> 4194304 3746.45> >>>>>>>> >>>>>>>> mpirun -np 2 --mca btl self,sm osu_bw> >>>>>>>>> # OSU MPI Bandwidth Test> >>>>>>> # Size Bandwidth (MB/s)> >>>>>>>> 1 2.98> >>>>>>> 2 5.97> >>>>>>> 4 11.99> >>>>>>> 8 23.47> >>>>>>> > 16 50.64> >>>>>>> 32 99.91> >>>>>>> 64 197.87> >>>>>>> 128 >> 343.32> >>>>>>> 256 667.48> >>>>>>> 512 1200.86> >>>>>>> 1024 2050.05> >>>>>>>> 2048 3578.52> >>>>>>> 4096 3966.92> >>>>>>> 8192 5687.96> >>>>>>> > 16384 7395.88> >>>>>>> 32768 7101.41> >>>>>>> 65536 >> 7619.49> >>>>>>> 131072 7978.09> >>>>>>> 262144 8648.87> >>>>>>> 524288 > 9129.18> >>>>>>> 1048576 10525.31> >>>>>>> 2097152 10511.63> >>>>>>> > 4194304 10489.66> >>>>>>>> >>>>>>> mpirun -np 2 --mca btl >> self,sm,openib osu_bw> >>>>>>> # OSU MPI Bandwidth Test> >>>>>>> # Size > Bandwidth (MB/s)> >>>>>>> 1 2.02> >>>>>>> 2 3.00> >>>>>>> 4 9.99> >>>>>>> 8 > 19.96> >>>>>>> 16 40.10> >>>>>>> 32 70.63> >>>>>>> >> 64 144.08> >>>>>>> 128 282.21> >>>>>>> 256 543.55> >>>>>>> 5121032.61 >>>>>>>>>> 1024 1871.09> >>>>>>> 2048 3294.07> >>>>>>> 4096 2336.48> >>>>>>>> 8192 3142.22> >>>>>>> 16384 3419.93> >>>>>>> 32768 3647.30> >>>>>>> > 65536 3725.40> >>>>>>> 131072 3749.43> >>>>>>> 262144 >> 3765.31> >>>>>>> 524288 3771.06> >>>>>>> 1048576 3772.54> >>>>>>> 2097152 > 3760.93> >>>>>>> 4194304 3745.37> >>>>>>>> >>>>>>> ----- Original Message > -----> >>>>>>> From: tmish...@jcity.maeda.co.jp> >>>>>>>>> To: "Open MPI Developers" <de...@open-mpi.org>> >>>>>>> Sent: > Wednesday, July 27, 2016 6:04:48 AM> >>>>>>> Subject: Re: [OMPI devel] sm > BTL performace of theopenmpi-2.0.0 >>>>>>>>>>>>>>>>>> HiNathan,> >>>>>>>> >>>>>>> I applied those commits > and ran again without any BTLspecified. >>>>>>>>>>>>>>>>>> Then, although it says "mca: bml: Using vader btl for > send to> >>>>>> [[18993,1],1]> >>>>>>> on node manage",> >>>>>>> the osu_bw > still shows it's very slow as shown below:> >>>>>>>>>>>>>>>>> [mishima@manage OMB-3.1.1-openmpi2.0.0]$ mpirun -np 2 > -mca> >>>>>> btl_base_verbose> >>>>>>> 10 -bind-to core -report-bindings > osu_bw> >>>>>>> [manage.cluster:17482] MCW rank 0 bound >> to socket 0[core 0[hwt0]]:> >>>>>>> [B/././././.][./././././.]> >>>>>>> > [manage.cluster:17482] MCW rank 1 bound to socket 0[core 1[hwt0]]:> >>>>>>> > [./B/./././.][./././././.]> >>>>>>> >> [manage.cluster:17487] mca: base: components_register:registering> >>>>>>>> framework btl components> >>>>>>> [manage.cluster:17487] mca: base: > components_register: foundloaded> >>>>>>> component >> self> >>>>>>> [manage.cluster:17487] mca: base: > components_register:component >>>>> self> >>>>>>> register function successful> >>>>>>> > [manage.cluster:17487] mca: base: components_register: foundloaded> >>>>>>> > component vader> >>>>>>> [manage.cluster:17488] mca: base: >> components_register:registering> >>>>>>> framework btl components> >>>>>>>> [manage.cluster:17488] mca: base: components_register: foundloaded> >>>>>>>> component self> >>>>>>> [manage.cluster:17487] >> mca: base: components_register:component >>>>> vader> >>>>>>> register function successful> >>>>>>> > [manage.cluster:17488] mca: base: components_register:component >>>>> self> >>>>>>> register function successful> >>>>>>> > [manage.cluster:17488] mca: base: components_register: foundloaded> >>>>>>> > component vader> >>>>>>> [manage.cluster:17487] mca: base: >> components_register: foundloaded> >>>>>>> component tcp> >>>>>>> > [manage.cluster:17488] mca: base: components_register:component >>>>> vader>>>>>>> register function successful> >>>>>>> > [manage.cluster:17488] mca: base: components_register: foundloaded> >>>>>>> > component tcp> >>>>>>> [manage.cluster:17487] mca: base: >> components_register:component >> tcp> >>>>>>> register function successful> >>>>>>> [manage.cluster:17487] > mca: base: components_register: foundloaded> >>>>>>> component sm> >>>>>>> > [manage.cluster:17488] mca: base: >> components_register:component >> tcp> >>>>>>> register function successful> >>>>>>> [manage.cluster:17488] > mca: base: components_register: foundloaded> >>>>>>> component sm> >>>>>>> > [manage.cluster:17487] mca: base: >> components_register:component >> sm> >>>>>>> register function successful> >>>>>>> [manage.cluster:17488] > mca: base: components_register:component >> sm> >>>>>>> register function successful> >>>>>>> [manage.cluster:17488] > mca: base: components_register: foundloaded> >>>>>>> component openib> >>>>>>>> [manage.cluster:17487] mca: base: >> components_register: foundloaded> >>>>>>> component openib> >>>>>>> > [manage.cluster:17488] mca: base: components_register:component >>>>> openib> >>>>>>> register function successful> >>>>>>> > [manage.cluster:17488] mca: base: components_open: opening btl> >> > components> >>>>>>> [manage.cluster:17488] mca: base: components_open: >> found loaded> >> component> >>>>>>> self> >>>>>>> [manage.cluster:17488] > mca: base: components_open: componentself >>>>> open> >>>>>>> function successful> >>>>>>> [manage.cluster:17488] > mca: base: components_open: found loaded> >> component> >>>>>>> vader> >>>>>>>> [manage.cluster:17488] mca: base: >> components_open: componentvader> >> open> >>>>>>> function successful> >>>>>>>> [manage.cluster:17488] mca: base: components_open: found loaded> >> > component> >>>>>>> tcp> >>>>>>> >> [manage.cluster:17488] mca: base: components_open: componenttcp >>>>> open> >>>>>>> function successful> >>>>>>> [manage.cluster:17488] > mca: base: components_open: found loaded> >> component> >>>>>>> sm> >>>>>>> > [manage.cluster:17488] mca: base: components_open: >> component smopen> >>>>>>> function successful> >>>>>>> > [manage.cluster:17488] mca: base: components_open: found loaded> >> > component> >>>>>>> openib> >>>>>>> [manage.cluster:17488] mca: base: >> components_open: componentopenib> >> open> >>>>>>> function successful> >>>>>>>> [manage.cluster:17488] select: initializing btl component self> >>>>>>>> [manage.cluster:17488] select: init of >> component self returned> >> success> >>>>>>> [manage.cluster:17488] > select: initializing btl component vader> >>>>>>> [manage.cluster:17487] > mca: base: components_register:component >>>>> openib> >>>>>>> register function successful> >>>>>>> > [manage.cluster:17487] mca: base: components_open: opening btl> >> > components> >>>>>>> [manage.cluster:17487] mca: base: components_open: >> found loaded> >> component> >>>>>>> self> >>>>>>> [manage.cluster:17487] > mca: base: components_open: componentself >>>>> open> >>>>>>> function successful> >>>>>>> [manage.cluster:17487] > mca: base: components_open: found loaded> >> component> >>>>>>> vader> >>>>>>>> [manage.cluster:17487] mca: base: >> components_open: componentvader> >> open> >>>>>>> function successful> >>>>>>>> [manage.cluster:17487] mca: base: components_open: found loaded> >> > component> >>>>>>> tcp> >>>>>>> >> [manage.cluster:17487] mca: base: components_open: componenttcp >>>>> open> >>>>>>> function successful> >>>>>>> [manage.cluster:17487] > mca: base: components_open: found loaded> >> component> >>>>>>> sm> >>>>>>> > [manage.cluster:17487] mca: base: components_open: >> component smopen> >>>>>>> function successful> >>>>>>> > [manage.cluster:17487] mca: base: components_open: found loaded> >> > component> >>>>>>> openib> >>>>>>> [manage.cluster:17488] select: init of >> component vader returned> >> success> >>>>>>> [manage.cluster:17488] > select: initializing btl component tcp> >>>>>>> [manage.cluster:17487] mca: > base: components_open: componentopenib> >> open> >>>>>>>>> function successful> >>>>>>> [manage.cluster:17487] select: > initializing btl component self> >>>>>>> [manage.cluster:17487] select: > init of component self returned> >> success> >>>>>>> >> [manage.cluster:17487] select: initializing btl component vader> >>>>>>> > [manage.cluster:17488] select: init of component tcp returned> >> success> >>>>>>>> [manage.cluster:17488] select: initializing >> btl component sm> >>>>>>> [manage.cluster:17488] select: init of > component sm returnedsuccess> >>>>>>> [manage.cluster:17488] select: > initializing btl componentopenib >>>>>>>>>> [manage.cluster:17487] select: init of component vader > returned> >> success> >>>>>>> [manage.cluster:17487] select: initializing > btl component tcp> >>>>>>> [manage.cluster:17487] select: >> init of component tcp returned> >> success> >>>>>>> > [manage.cluster:17487] select: initializing btl component sm> >>>>>>> > [manage.cluster:17488] Checking distance from this process to> >>>>>> >> device=mthca0> >>>>>>> [manage.cluster:17488] hwloc_distances->nbobjs=2> >>>>>>>> [manage.cluster:17488] hwloc_distances->latency[0]=1.000000> >>>>>>>> [manage.cluster:17488] >> hwloc_distances->latency[1]=1.600000> >>>>>>> [manage.cluster:17488] > hwloc_distances->latency[2]=1.600000> >>>>>>> [manage.cluster:17488] > hwloc_distances->latency[3]=1.000000> >>>>>>> >> [manage.cluster:17488] ibv_obj->type set to NULL> >>>>>>> > [manage.cluster:17488] Process is bound: distance to device is> >> > 0.000000> >>>>>>> [manage.cluster:17487] select: init of component sm >> returnedsuccess> >>>>>>> [manage.cluster:17487] select: initializing btl > componentopenib >>>>>>>>>> [manage.cluster:17488] openib BTL: rdmacm CPC unavailable > foruse >> on> >>>>>>> mthca0:1; skipped> >>>>>>> [manage.cluster:17487] Checking > distance from this process to> >>>>>> device=mthca0> >>>>>>> > [manage.cluster:17487] hwloc_distances->nbobjs=2> >>>>>>> >> [manage.cluster:17487] hwloc_distances->latency[0]=1.000000> >>>>>>> > [manage.cluster:17487] hwloc_distances->latency[1]=1.600000> >>>>>>> > [manage.cluster:17487] hwloc_distances->latency[2]=1.600000> >>>>>>>>> [manage.cluster:17487] hwloc_distances->latency[3]=1.000000> >>>>>>>> [manage.cluster:17487] ibv_obj->type set to NULL> >>>>>>> > [manage.cluster:17487] Process is bound: distance to device is> >>>> 0.000000> >>>>>>> [manage.cluster:17488] [rank=1] openib: using port > mthca0:1> >>>>>>> [manage.cluster:17488] select: init of component > openibreturned >>>>> success> >>>>>>> [manage.cluster:17487] openib BTL: rdmacm CPC > unavailable foruse >> on> >>>>>>> mthca0:1; skipped> >>>>>>> [manage.cluster:17487] [rank=0] > openib: using port mthca0:1>>>>> >> [manage.cluster:17487] select: init of > component openib returnedsuccess> >>>>>>> >> [manage.cluster:17488] mca: bml: Using self btl for send to> >> > [[18993,1],1]> >>>>>>> on node manage> >>>>>>> [manage.cluster:17487] mca: > bml: Using self btl for send to> >> [[18993,1],0]> >>>>>>> >> on node manage> >>>>>>> [manage.cluster:17488] mca: bml: Using vader btl > for send to> >>>>>> [[18993,1],0]> >>>>>>> on node manage> >>>>>>> > [manage.cluster:17487] mca: bml: Using vader btl for send >> to> >>>>>> [[18993,1],1]> >>>>>>> on node manage> >>>>>>> # OSU MPI > Bandwidth Test v3.1.1> >>>>>>> # Size Bandwidth (MB/s)> >>>>>>> 1 1.76> >>>>>>>> 2 3.53> >>>>>>> 4 7.06> >>>>>>> 8 14.46> >>>>>>> 16 >> 29.12> >>>>>>> 32 57.54> >>>>>>> 64 100.12> >>>>>>> 128 157.78> >>>>>>> > 256 277.32> >>>>>>> 512 477.53> >>>>>>> 1024 894.81> >>>>>>> 2048 1330.68> >>>>>>>> 4096 278.58> >>>>>>> 8192 516.00> >>>>>>> >> 16384 762.99> >>>>>>> 32768 1037.19> >>>>>>> 65536 1181.66> >>>>>>> > 131072 1261.91> >>>>>>> 262144 1237.39> >>>>>>> 524288 1247.86> >>>>>>> > 1048576 1252.04> >>>>>>> 2097152 1273.46> >>>>>>> 4194304 1281.21> >>>>>>> > [manage.cluster:17488] mca: base: close: component self closed> >>>>>>> > [manage.cluster:17488] mca: base: close: >> unloading componentself >>>>>>>>>> [manage.cluster:17487] mca: base: close: component self closed> >>>>>>>> [manage.cluster:17487] mca: base: close: unloading componentself >>>>>>>>>> [manage.cluster:17488] mca: base: close: component vader > closed> >>>>>>> [manage.cluster:17488] mca: base: close: unloading > componentvader> >>>>>>> [manage.cluster:17487] mca: base: close: >> component vader closed> >>>>>>> [manage.cluster:17487] mca: base: close: > unloading componentvader> >>>>>>> [manage.cluster:17488] mca: base: close: > component tcp closed> >>>>>>> >> [manage.cluster:17488] mca: base: close: unloading componenttcp >>>>>>>>>> [manage.cluster:17487] mca: base: close: component tcp closed> >>>>>>>> [manage.cluster:17487] mca: base: close: unloading componenttcp >>>>>>>>>> [manage.cluster:17488] mca: base: close: component sm closed> >>>>>>>> [manage.cluster:17488] mca: base: close: unloading component sm> >>>>>>>> [manage.cluster:17487] mca: base: close: >> component sm closed> >>>>>>> [manage.cluster:17487] mca: base: close: > unloading component sm> >>>>>>> [manage.cluster:17488] mca: base: close: > component openibclosed >>>>>>>>>> [manage.cluster:17488] mca: base: close: unloading > componentopenib> >>>>>>> [manage.cluster:17487] mca: base: close: component > openibclosed >>>>>>>>>> [manage.cluster:17487] mca: base: close: unloading > componentopenib> >>>>>>>> >>>>>>> Tetsuya Mishima> >>>>>>>> >>>>>>> > 2016/07/27 9:20:28、"devel"さんは「Re: [OMPI devel] sm BTL> >> performace >> of> >>>>>>> the openmpi-2.0.0」で書きました> >>>>>>>> sm is deprecated in > 2.0.0 and will likely be removed in favorof >>>>> vader> >>>>>> in> >>>>>>> 2.1.0.> >>>>>>>>> >>>>>>>> This issue is > probably this known issue:> >>>>>>> > https://github.com/open-mpi/ompi-release/pull/1250> >>>>>>>>> >>>>>>>> > Please apply those >> commits and see if it fixes the issue foryou.> >>>>>>>>> >>>>>>>> > -Nathan> >>>>>>>>> >>>>>>>>> On Jul 26, 2016, at 6:17 PM, > tmish...@jcity.maeda.co.jpwrote: >>>>>>>>>>>>>>>>>>>>>> Hi Gilles,> >>>>>>>>>> >>>>>>>>> Thanks. I ran > again with --mca pml ob1 but I've got the same> >> results> >>>>>> as> >>>>>>>>>> below:> >>>>>>>>>> >>>>>>>>> [mishima@manage >> OMB-3.1.1-openmpi2.0.0]$ mpirun -np 2 -mcapml >> ob1> >>>>>>> -bind-to> >>>>>>>>> core -report-bindings osu_bw> >>>>>>>>> > [manage.cluster:18142] MCW rank 0 bound to socket 0[core 0[hwt >>>>> 0]]:> >>>>>>>>> [B/././././.][./././././.]> >>>>>>>>> > [manage.cluster:18142] MCW rank 1 bound to socket 0[core 1[hwt >>>>> 0]]:> >>>>>>>>> [./B/./././.][./././././.]> >>>>>>>>> # OSU MPI > Bandwidth Test v3.1.1> >>>>>>>>> # Size Bandwidth (MB/s)> >>>>>>>>> 1 1.48> >>>>>>>>>> 2 3.07> >>>>>>>>> 4 6.26> >>>>>>>>> 8 12.53> >>>>>>>>>>> 16 24.33_______________________________________________ >> devel mailing list >> devel@lists.open-mpi.org >> > https://rfd.newmexicoconsortium.org/mailman/listinfo/devel_______________________________________________ > >> devel mailing list >> > de...@lists.open-mpi.orghttps://rfd.newmexicoconsortium.org/mailman/listinfo/devel > _______________________________________________ > devel mailing list > devel@lists.open-mpi.org > https://rfd.newmexicoconsortium.org/mailman/listinfo/devel _______________________________________________ devel mailing list devel@lists.open-mpi.org https://rfd.newmexicoconsortium.org/mailman/listinfo/devel