I've been really impressed with Mine Çetinkaya-Rundel at Duke who teaches
intro stats using RStudio and literate programming [1]. There is a nice
summary of the approach in this article [2]. Mine and I (and Jenny!) were
at a reproducible science workshop last fall, which is where I learned
about this course. Materials on GitHub [3].

Cheers,
Karen

[1] https://stat.duke.edu/~mc301/teaching/
[2] http://chance.amstat.org/2014/09/reproducible-paradigm/
[3] https://github.com/mine-cetinkaya-rundel/sta101_sp15


On Tue, Apr 21, 2015 at 1:43 PM, Robert M. Flight <[email protected]>
wrote:

> Does anyone know of any examples where software carpentry type skills have
> been integrated into an undergraduate science curriculum? It seems to me
> that the various skills taught in software carpentry could be integrated
> into an undergraduate science curriculum if done correctly, given the
> prevalence of data manipulations that are frequently performed in
> undergraduate science labs (chemistry titrations / conversions, physics
> equation fitting, biology number manipulations), at least in my experience
> over 10 years ago. I don't imagine that things have changed, and have
> likely gotten worse.
>
> I know that Jenny Bryan is integrating a lot of this stuff into her
> advanced stats class (which is awesome), but the more I think about it, it
> seems that it would be useful to introduce things earlier rather than later.
>
> I would be very appreciative if anyone has any specific examples from
> their own or others teaching.
>
> Regards,
>
> -Robert
>
> Robert M Flight, PhD
> Bioinformatics Research Associate
> Resource Center for Stable Isotope Resolved Metabolomics
> Markey Cancer Center
> University of Kentucky
> Lexington, KY
>
> Twitter: @rmflight
> Web: rmflight.github.io
> EM [email protected]
> PH 502-509-1827
>
> The most exciting phrase to hear in science, the one that heralds new
> discoveries, is not "Eureka!" (I found it!) but "That's funny ..." - Isaac
> Asimov
>
>
> _______________________________________________
> Discuss mailing list
> [email protected]
>
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>



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