I don't think there is a way around the permissions issue unless you join EON 
to the AD domain so that it knows all the users the files belong to 
respectively and could sync them as such.

The interruption issue i'm not sure. There could be a couple reasons. What 
version is rsync is the client running? If its not 3.0.7 maybe upgrade. 
* disk full
* An idle connection caused a router or remote-shell server to close the 
connection.
* A network error caused the connection to be dropped.

Yes symlink .bashrc to .bash_profile
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