Actually I want to obfuscate my own source files and function names also will be ofuscated in my source files, if /doctrine files remain un-encoded, since the function names in my file is obfuscated it returns function doesn't exist error as it does not recognize the functions in un-encoded /doctrine files, so I should obfuscate doctrine too, that my code recognize the functions, are you familiar with ionCube and do you know how it works? How composer.json and composer.lock work? do they call doctrine files remotely from repository server? please clarify.
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