All these seem to have happened with a hg mv. http://www.selenic.com/mercurial/wiki/index.cgi/FixingMissingRevlog indicates how to fix this. However, such a fix would not be a revision of itself, I think, so if run on the central repository, it probably would have to be run by all before hey check in anything else, I am not sure.
Tried to run this conver, however, symlinking src->dolfin (revision 1127) and later replacing it with a src folder made the convert fail: 1127 Added src symlink. abort: Is a directory: /Users/ilmarw/tmp/dolfin-fix/src These errors were not detected by earlier versions of hg, but they seem genuine. ilmar Shawn Walker wrote: > I just updated my dolfin to the current version and I get the same > verify errors: > > [EMAIL PROTECTED] ~/FENICS/dolfin > $ hg verify > checking changesets > checking manifests > crosschecking files in changesets and manifests > checking files > demo/pde/dg/poisson/python/[EMAIL PROTECTED]: empty or missing copy > source revlog demo/pde/dg/python/demo.py.orig:000000000000 > src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy > source revision is nullid > src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 > src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy > source revision is nullid > src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 > src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy source revision is > nullid src/demo/mesh/partitioning/test.py:000000000000 > 4878 files, 4787 changesets, 42101 total revisions > 4 integrity errors encountered! > (first damaged changeset appears to be 3223) > > - Shawn > > On Fri, 19 Sep 2008, Dag Lindbo wrote: > >> My clone has not been updated since changeset 4723:ee68f8d883e3, Sept >> 4:th, and I have the exact same problem as Shawn. >> >> It seems to be the case that Mercurial 0.9.1 thinks the current head is >> fine. Running on the fenics.org server: >> >> >> [EMAIL PROTECTED]:~/hg$ hg clone /home/dolfin/hg/dolfin dolfin_tmp >> requesting all changes >> adding changesets >> adding manifests >> adding file changes >> added 4787 changesets with 42101 changes to 4878 files >> 1263 files updated, 0 files merged, 0 files removed, 0 files unresolved >> [EMAIL PROTECTED]:~/hg$ hg verify >> abort: no repo found! >> [EMAIL PROTECTED]:~/hg$ cd dolfin_tmp/ >> [EMAIL PROTECTED]:~/hg/dolfin_tmp$ hg verify >> checking changesets >> checking manifests >> crosschecking files in changesets and manifests >> checking files >> 4878 files, 4787 changesets, 42101 total revisions >> >> >> >> /Dag >> >> Shawn Walker wrote: >>> I recently updated dolfin YESTERDAY (thursday, sept. 18th). I just ran >>> hg verify and got: >>> >>> [EMAIL PROTECTED] ~/FENICS/dolfin >>> $ hg verify >>> checking changesets >>> checking manifests >>> crosschecking files in changesets and manifests >>> checking files >>> demo/pde/dg/poisson/python/[EMAIL PROTECTED]: empty or missing copy >>> source revlog demo/pde/dg/python/demo.py.orig:000000000000 >>> src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy >>> source revision is nullid >>> src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 >>> src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy >>> source revision is nullid >>> src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 >>> src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy source revision is >>> nullid src/demo/mesh/partitioning/test.py:000000000000 >>> 4876 files, 4783 changesets, 42084 total revisions >>> 4 integrity errors encountered! >>> (first damaged changeset appears to be 3223) >>> >>> I have not updated dolfin with the new stuff from today. I can do that >>> if that would be helpful. >>> >>> - Shawn >>> >>> On Fri, 19 Sep 2008, Johan Hake wrote: >>> >>>> On Friday 19 September 2008 14:31:25 Johan Hake wrote: >>>>> On Friday 19 September 2008 13:58:14 Ola Skavhaug wrote: >>>>>> Anders Logg skrev den 19/09-2008 f?lgende: >>>>>>> If I run hg verify on the repository, I get >>>>>>> >>>>>>> checking changesets >>>>>>> checking manifests >>>>>>> crosschecking files in changesets and manifests >>>>>>> checking files >>>>>>> doc/manual/[EMAIL PROTECTED]: unpacking 0cfaffa5665f: >>>>>>> Error >>>>>>> -3 while decompressing data: incorrect data check >>>>>>> doc/manual/[EMAIL PROTECTED]: unpacking 0c1a7c863c14: >>>>>>> Error >>>>>>> -3 while decompressing data: incorrect data check >>>>>>> doc/manual/[EMAIL PROTECTED]: unpacking 0945fe8b62a5: >>>>>>> Error >>>>>>> -3 while decompressing data: incorrect data check >>>>>>> dolfin/graph/[EMAIL PROTECTED]: checking rename of >>>>>>> f8fc00fbec5f: data/src/kernel/graph/GraphPartition.cpp.i: no node >>>>>>> 49bdb952d2af811ab6fe897b3ad838a717a5aafc >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: index contains -514678021 >>>>>>> extra bytes >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: unpacking 2808e8d20b39: >>>>>>> integrity check failed on >>>>>>> data/src/kernel/graph/GraphPartition.cpp.d:5 >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: rev 6 points to unexpected >>>>>>> changeset 11 >>>>>>> (expected 3009) >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: ff3ad1d2ffbb not in >>>>>>> manifests >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: unpacking ff3ad1d2ffbb: >>>>>>> incompatible revision flag b900 >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: checking parents of >>>>>>> ff3ad1d2ffbb: list index out of range >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: checking rename of >>>>>>> ff3ad1d2ffbb: list index out of range >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: rev 7 point to nonexistent >>>>>>> changeset 1820866133 >>>>>>> (expected 3009) >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 148482c41836 not in >>>>>>> manifests >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: unpacking 148482c41836: >>>>>>> incompatible revision flag 4114 >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: checking parents of >>>>>>> 148482c41836: list index out of range >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: checking rename of >>>>>>> 148482c41836: list index out of range >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 3ad1d2ffbb05 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: fb94ecb0aa58 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 674e28207dcf in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 7d9c717eb332 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 025f312f7c22 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: ba5051dff67d in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 7196ccf07616 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: af020bb3ace1 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: c95515e95a3e in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: c563075bf5b8 in manifests >>>>>>> not found >>>>>>> src/kernel/graph/[EMAIL PROTECTED]: 49bdb952d2af in manifests >>>>>>> not found >>>>>>> 4877 files, 4786 changesets, 42087 total revisions >>>>>>> 2 warnings encountered! >>>>>>> 27 integrity errors encountered! >>>>>>> (first damaged changeset appears to be 2180) >>>>>>> >>>>>>> Does anyone (or everyone) else get the same error? Is there a way to >>>>>>> fix it? >>>>>>> >>>>>>> -- >>>>>>> Anders >>>>>> >>>>>> I got the following errors when running hg verify: >>>>>> [EMAIL PROTECTED]:~/devel/dolfin-petsc$ hg verify >>>>>> checking changesets >>>>>> checking manifests >>>>>> crosschecking files in changesets and manifests >>>>>> checking files >>>>>> demo/pde/dg/poisson/python/[EMAIL PROTECTED]: empty or missing copy >>>>>> source revlog demo/pde/dg/python/demo.py.orig:000000000000 >>>>>> src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy >>>>>> source revision is nullid >>>>>> src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 >>>>>> src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy >>>>>> source revision is nullid >>>>>> src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 >>>>>> src/demo/mesh/partitioning/cpp/[EMAIL PROTECTED]: copy source revision >>>>>> is >>>>>> nullid src/demo/mesh/partitioning/test.py:000000000000 >>>>>> 4876 files, 4783 changesets, 42084 total revisions >>>>>> 4 integrity errors encountered! >>>>>> (first damaged changeset appears to be 3223) >>>>> >>>>> Same here. >>>>> >>>>>> I have no idea what to do with it :) >>>>> >>>>> Maybee this give us some clues: >>>>> >>>>> <http://marc.info/?l=mercurial&m=120594475414715&w=2> >>>> >>>> and another one: >>>> >>>> <http://www.nabble.com/Integrity-Error-td19023792.html> >>>> >>>> Still complicated... >>>> >>>> and not sure we have the same error as them :) >>>> >>>> Johan >>>> _______________________________________________ >>>> DOLFIN-dev mailing list >>>> [email protected] >>>> http://www.fenics.org/mailman/listinfo/dolfin-dev >>>> >>>> >>> >>> ------------------------------------------------------------------------ >>> >>> _______________________________________________ >>> DOLFIN-dev mailing list >>> [email protected] >>> http://www.fenics.org/mailman/listinfo/dolfin-dev >> >> > > ------------------------------------------------------------------------ > > _______________________________________________ > DOLFIN-dev mailing list > [email protected] > http://www.fenics.org/mailman/listinfo/dolfin-dev _______________________________________________ DOLFIN-dev mailing list [email protected] http://www.fenics.org/mailman/listinfo/dolfin-dev
