DOLFIN now fails to build with the following error: c++ -o dolfin/io/VTKFile.os -c -Wall -pipe -ansi -BOOST_UBLAS_NDEBUG -DDEBUG -g -O2 -Werror -DPACKAGE_VERSION=\"0.9.7\" -DHAS_LAPACK=1 -DHAS_ZLIB=1 -fno-strict-aliasing -fPIC -fprofile-arcs -ftest-coverage -I. -I/opt/fenics/include -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libxml2 -I/usr/include dolfin/io/VTKFile.cpp ./dolfin/function/Function.h: In member function 'void dolfin::VTKFile::write_cell_data(const dolfin::Function&, std::string) const': ./dolfin/function/Function.h:179: error: 'void dolfin::Function::get(double*, dolfin::uint, const dolfin::uint*) const' is private dolfin/io/VTKFile.cpp:515: error: within this context scons: *** [dolfin/io/VTKFile.os] Error 1 scons: building terminated because of errors. dolfin/io/VTKFile.os failed: Error 1
Johannes On Fri, Mar 12, 2010 at 10:12 AM, <[email protected]> wrote: > ------------------------------------------------------------ > revno: 4633 > committer: Garth N. Wells <[email protected]> > branch nick: dolfin-all > timestamp: Fri 2010-03-12 09:09:28 +0000 > message: > VTK clean ups. > modified: > dolfin/io/VTKFile.cpp > > > -- > lp:dolfin > https://code.launchpad.net/~dolfin-core/dolfin/main > > Your team DOLFIN Core Team is subscribed to branch lp:dolfin. > To unsubscribe from this branch go to > https://code.launchpad.net/~dolfin-core/dolfin/main/+edit-subscription. > > === modified file 'dolfin/io/VTKFile.cpp' > --- dolfin/io/VTKFile.cpp 2010-03-09 23:40:57 +0000 > +++ dolfin/io/VTKFile.cpp 2010-03-12 09:09:28 +0000 > @@ -1,4 +1,4 @@ > -// Copyright (C) 2005-2009 Garth N. Wells. > +// Copyright (C) 2005-2010 Garth N. Wells. > // Licensed under the GNU LGPL Version 2.1. > // > // Modified by Anders Logg 2005-2006. > @@ -7,7 +7,7 @@ > // Modified by Niclas Jansson 2009. > // > // First added: 2005-07-05 > -// Last changed: 2009-10-08 > +// Last changed: 2010-03-12 > > #include <ostream> > #include <sstream> > @@ -21,7 +21,6 @@ > #include <dolfin/function/Function.h> > #include <dolfin/function/FunctionSpace.h> > #include <dolfin/la/GenericVector.h> > -#include <dolfin/la/LinearAlgebraFactory.h> > #include <dolfin/mesh/Cell.h> > #include <dolfin/mesh/Mesh.h> > #include <dolfin/mesh/MeshFunction.h> > @@ -188,8 +187,7 @@ > } > else if (encoding == "base64" || encoding == "compressed") > { > - std::vector<float> data; > - data.resize(3*mesh.num_vertices()); > + std::vector<float> data(3*mesh.num_vertices()); > std::vector<float>::iterator entry = data.begin(); > for (VertexIterator v(mesh); !v.end(); ++v) > { > @@ -220,8 +218,7 @@ > else if (encoding == "base64" || encoding == "compressed") > { > const int size = mesh.num_cells()*mesh.type().num_entities(0); > - std::vector<boost::uint32_t> data; > - data.resize(size); > + std::vector<boost::uint32_t> data(size); > std::vector<boost::uint32_t>::iterator entry = data.begin(); > for (CellIterator c(mesh); !c.end(); ++c) > { > @@ -246,8 +243,7 @@ > } > else if (encoding == "base64" || encoding == "compressed") > { > - std::vector<boost::uint32_t> data; > - data.resize(mesh.num_cells()*num_cell_vertices); > + std::vector<boost::uint32_t> data(mesh.num_cells()*num_cell_vertices); > std::vector<boost::uint32_t>::iterator entry = data.begin(); > for (uint offsets = 1; offsets <= mesh.num_cells(); offsets++) > *entry++ = offsets*num_cell_vertices; > @@ -275,8 +271,7 @@ > } > else if (encoding == "base64" || encoding == "compressed") > { > - std::vector<boost::uint8_t> data; > - data.resize(mesh.num_cells()); > + std::vector<boost::uint8_t> data(mesh.num_cells()); > std::vector<boost::uint8_t>::iterator entry = data.begin(); > for (uint types = 0; types < mesh.num_cells(); types++) > *entry++ = vtk_cell_type; > @@ -343,11 +338,9 @@ > // Open file > std::ofstream fp(vtu_filename.c_str(), std::ios_base::app); > > - // Allocate memory for function values at vertices > + // Get function values at vertices > const uint size = mesh.num_vertices()*dim; > Array<double> values(size); > - > - // Get function values at vertices > u.compute_vertex_values(values, mesh); > > if (rank == 0) > @@ -516,9 +509,10 @@ > ++cell_offset; > } > > - // Get values > + // Get values > + u.gather(); > std::vector<double> values(dof_set.size()); > - u.vector().get(&values[0], dof_set.size(), &dof_set[0]); > + u.get(&values[0], dof_set.size(), &dof_set[0]); > > if (encoding == "ascii") > { > @@ -675,7 +669,7 @@ > pvtu_file << "<PDataArray type=\"Float32\" NumberOfComponents=\"3\"/>" << > std::endl; > pvtu_file << "</PPoints>" << std::endl; > > - for(uint i=0; i< MPI::num_processes(); i++) > + for(uint i = 0; i < MPI::num_processes(); i++) > { > std::string tmp_string = strip_path(vtu_name(i, MPI::num_processes(), > counter, ".vtu")); > pvtu_file << "<Piece Source=\"" << tmp_string << "\"/>" << std::endl; > @@ -968,4 +962,3 @@ > } > #endif > //---------------------------------------------------------------------------- > - > > > _______________________________________________ Mailing list: https://launchpad.net/~dolfin Post to : [email protected] Unsubscribe : https://launchpad.net/~dolfin More help : https://help.launchpad.net/ListHelp
