Johannes Ring skrev 2010-10-20 13.33:
On Wed, Oct 20, 2010 at 1:28 PM, Anders Logg<l...@simula.no> wrote:
Johannes Ring skrev 2010-10-20 08.15:
On Tue, Oct 19, 2010 at 5:56 PM, Anders Logg<l...@simula.no> wrote:
Johannes Ring skrev 2010-10-19 17.50:
On Tue, Oct 19, 2010 at 5:42 PM, Anders Logg<l...@simula.no> wrote:
Johannes Ring skrev 2010-10-19 17.35:
On Tue, Oct 19, 2010 at 1:41 PM, Anders Logg<l...@simula.no>
wrote:
On Tue, Oct 19, 2010 at 11:18:22AM +0200, Johannes Ring wrote:
On Tue, Oct 19, 2010 at 9:21 AM, Anders Logg<l...@simula.no>
wrote:
This has most likely been discussed before but I'm bringing it up
again anyway.
I get the following annoying message for each and every demo when I
configure DOLFIN on Lucid:
CMake Warning at demo/pde/poisson/cpp/CMakeLists.txt:31
(add_executable):
Cannot generate a safe runtime search path for target poisson-demo
because
files in some directories may conflict with libraries in implicit
directories:
runtime library [liblapack.so.3gf] in /usr/lib may be hidden by
files in:
/usr/lib/atlas
runtime library [libblas.so.3gf] in /usr/lib may be hidden by
files in:
/usr/lib/atlas
Some of these libraries may not be found correctly.
Any way to fix this?
Setting -DCMAKE_SKIP_RPATH:BOOL=ON when configuring DOLFIN made the
warnings go away for me. Does it work for you? Maybe we can use that
as the default?
Johannes
That doesn't work for me. If I add that flag, CMake is unable to find
PETSc and SLEPc.
I have PETSc and SLEPc installed by Dorsal.
Try to add
CONFOPTS="-DCMAKE_PREFIX_PATH:PATH=${INSTALL_PATH}"
in dolfin.package and remove dorsal_build_dir. Then re-run Dorsal.
Hopefully this will get rid of the warnings. Does it?
Johannes
I'm building DOLFIN using cmake.local in DOLFIN (not Dorsal), but will
try
this option later.
You can also use it as an environment variable:
export CMAKE_PREFIX_PATH=<dorsal/installation/path>
I'm currently trying to build on my macbook which is a pain. (Don't
know
how
the mac people can stand working on it.) My current problem is I can't
even
build UFC correctly. If after building and installing (which seems to
work
fine) I type "python -c 'import ufc'", I get this error:
Fatal Python error: Interpreter not initialized (version mismatch?)
Abort trap
Any bright ideas?
Try with
export VERSIONER_PYTHON_PREFER_32_BIT=yes
Johannes
No luck. Still the same problem.
OK. Have you done any system updates or updated MacPorts recently? It
could be a conflict between system Python and MacPorts Python. Have
you tried running python_select again?
Johannes
Yes, I've done some updates. I tried python_select now and if I set it to
python26, then Python still crashes when I do python -c "import ufc".
Did you rebuild UFC?
If I set it to python26-apple, I can import UFC. But the DOLFIN configure
still crashes during configure.
Should it be python26 or python26-apple? (I assume the former.) Should I set
it to python26 and then rebuild all packages with Dorsal?
It should be python26 when using MacPorts and, yes, I would try
rebuilding everything with Dorsal.
I rebuilt everything with Dorsal and that works fine, including DOLFIN.
The problem was that I was building DOLFIN manually (using cmake.local)
and hadn't set all the required variables. The one thing that was
missing (which Dorsal knew to include) was
export DYLD_FRAMEWORK_PATH=/opt/local/Library/Frameworks
--
Anders
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