Dmitri;

The issue is as you expected. I have a cygwin/unix doxygen and a Windows
graphviz (2.30). The absolute paths (/cygdrive/...) sent to graphviz are
rejected. Since I can't download a linux version of graphviz to a Windows
system, is there a Windows version of doxygen lying around?

I have extracted all the commands, removed absolute paths, and executed them
in a cygwin bash shell. No error messages were generated. Some classes in
the class list are not in the class hierarchy - no hierarchy graphs are
generated. Is there a reason for this?


art

PS: Thanks for the tip below.

-----Original Message-----
From: Dimitri van Heesch [mailto:doxy...@gmail.com] 
Sent: Thursday, January 16, 2014 12:20 PM
To: Arthur Schwarz
Cc: doxygen-users@lists.sourceforge.net
Subject: Re: [Doxygen-users] Unknown Error

Hi Arthur,

Please set DOT_CLEANUP to NO in the config file and run doxygen from the
command line with the -d ExtCmd option.
Doxygen will then output the exact command with parameters it is trying to
execute.

For a failing command, try to execute it directly from the command line.
That may give some more insight on what is wrong
(e.g. maybe your version of dot doesn't have pdf output built in, or maybe
you are mixing a windows build of dot with a Cygwin build of doxygen and dot
cannot handle a cygwin-style path it is fed).

Regards,
  Dimitri

On 16 Jan 2014, at 17:29 , Arthur Schwarz <aschwarz1...@att.net> wrote:

> Win 7
> Doxygen 1.8.6 (cygwin)
> 
> I have errors generated by Doxygen and don't know how to fix them. Before
I ran doxygen I deleted all generated subdirectories (rm -rf *). So
execution ran on a clean slate. The errors seem to be generated by interface
programs that Doxygen uses.
> 
> Thanks
> art
> 
> Here is a sample of each error.
> 
> Error: dot: can't open
ReferenceManual/ReferenceManual/dd/d93/_slip_8_bison_8hpp__dep__incl.dot
> 
> error: Problems running dot: exit code=2, command='dot',
arguments='"ReferenceManual/latex/d8/d77/position_8hh__dep__incl.dot" -Tpdf
-o "ReferenceManual/latex/d8/d77/position_8hh__dep__incl.pdf"'
> 
> 
> Error: dot: can't open
ReferenceManual/latex/d0/d85/_slip_8h__dep__incl.dot
> 
> error: Problems running dot: exit code=2, command='dot',
arguments='"ReferenceManual/latex/d0/d85/_slip_8h__dep__incl.dot" -Tpdf -o
"ReferenceManual/latex/d0/d85/_slip_8h__dep__incl.pdf"'
> 
> 
> Error: dot: can't open ReferenceManual/ReferenceManual/graph_legend.dot
> 
> error: Problems running dot: exit code=2, command='dot',
arguments='"ReferenceManual/ReferenceManual/graph_legend.dot" -Tpng -o
"ReferenceManual/ReferenceManual/graph_legend.png"'
> 
>
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