David,

In version 1.8.8 (by head) a change has taken place about handling files
with unknown / unsupported extension. Till that version they were seen as
C-like files. In version 1.8.8 and up they are skipped, but it is possible
to use your own extension and map it to a supported version. When I change
the mapping line to:
  EXTENSION_MAPPING      = mod=c++ tpp=c++ dox=c++
I get the namespaces.

You will see some other errors etc as well (e.g. error: the type 'dirs' is
not supported for the entry tag within a navindex! Check your layout file!)
so it is advised to have a look at your own layout file as well.

Albert

On Fri, Jun 19, 2015 at 7:00 AM, David Morse <morse...@umn.edu> wrote:

> I recently upgraded doxygen to the most recent version and used the new
> version
> to regenerrate html documentation for a C++ project that includes several
> namespaces
> and an extensive hierarchy of doxygen modules. The source code for the
> project, called
> simpatico, is available at github.com/dmorse/simpatico
>
> I find that the html generated by new version generates does not contain
> the "Modules" or
> "Namespace" tabs that appeared in html generated by earlier versions. An
> old version of
> the documentation generated using doxygen 1.7.6.1, which includes these
> tabs, is
> available at 
> <http://dmorse.github.io/simpatico/doc/html/index.html>dmorse.github.io/simpatico/doc/html/index.html
>
>
> I recently upgraded first to 1.8.8 via ubuntu software manager (I am using
> Ubuntu linux).
> I had trouble with error messages from sqlite with this version, in
> addition to the problem
> described above. In an attempt to fix these problems, I tried upgrading to
> 1.8.9.1, which
> I installed by dowloading a tarball of the source code and compiling from
> source. Both of
> these recent versions generated a version of html in which the "Modules"
> and "Namespaces"
> tabs are absent from the header, though 1.8.9.1 did not generate error
> messages from
> sqlite.
>
> I did not change anything about the source files, and do not have any
> clues as to what
> could cause this change in behavior. I definitely want to retain the
> missing Modules and
> Namespace tabs, since these are often the fastest way to navigate to class
> documentation
> for a particular class.
>
> Does anyone have any ideas regarding the origin of the problem or how it
> could be
> fixed?
>
> -David
>
>
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