Hello DSpace Team, I am receiving error 500, please see image below and accompanying 2 attachments, I have installed DSpace 7.6 and trying to load web application:
[image: tomcat error.png] Regards, Lewatle -- All messages to this mailing list should adhere to the Code of Conduct: https://www.lyrasis.org/about/Pages/Code-of-Conduct.aspx --- You received this message because you are subscribed to the Google Groups "DSpace Community" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/dspace-community/03d01139-d623-4b85-bedf-11f2b31de7b9n%40googlegroups.com.
24-Apr-2024 11:14:35.642 INFO [main] org.apache.catalina.core.StandardServer.await A valid shutdown command was received via the shutdown port. Stopping the Server instance. 23-Apr-2024 11:14:35.643 INFO [main] org.apache.coyote.AbstractProtocol.pause Pausing ProtocolHandler ["http-nio-8080"] 23-Apr-2024 11:14:35.650 INFO [main] org.apache.catalina.core.StandardService.stopInternal Stopping service [Catalina] 23-Apr-2024 11:14:35.653 INFO [main] org.apache.coyote.AbstractProtocol.stop Stopping ProtocolHandler ["http-nio-8080"] 23-Apr-2024 11:14:35.657 INFO [main] org.apache.coyote.AbstractProtocol.destroy Destroying ProtocolHandler ["http-nio-8080"] 23-Apr-2024 11:14:35.679 WARNING [main] org.apache.catalina.loader.WebappClassLoaderBase.clearReferencesThreads The web application [server] appears to have started a thread named [Thread-1] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread: [email protected]/java.lang.Object.wait(Native Method) org.dspace.service.impl.HttpConnectionPoolService$IdleConnectionMonitorThread.run(HttpConnectionPoolService.java:176) 23-Apr-2024 11:14:35.680 SEVERE [main] org.apache.catalina.loader.WebappClassLoaderBase.checkThreadLocalMapForLeaks The web application [server] created a ThreadLocal with key of type [java.lang.ThreadLocal] (value [java.lang.ThreadLocal@764d6048]) and a value of type [org.apache.logging.log4j.core.LoggerContext] (value [org.apache.logging.log4j.core.LoggerContext@c0d8800]) but failed to remove it when the web application was stopped. Threads are going to be renewed over time to try and avoid a probable memory leak. 23-Apr-2024 11:14:35.681 SEVERE [main] org.apache.catalina.loader.WebappClassLoaderBase.checkThreadLocalMapForLeaks The web application [server] created a ThreadLocal with key of type [org.springframework.boot.SpringBootExceptionHandler.LoggedExceptionHandlerThreadLocal] (value [org.springframework.boot.SpringBootExceptionHandler$LoggedExceptionHandlerThreadLocal@11130be3]) and a value of type [org.springframework.boot.SpringBootExceptionHandler] (value [org.springframework.boot.SpringBootExceptionHandler@68fd3c4d]) but failed to remove it when the web application was stopped. Threads are going to be renewed over time to try and avoid a probable memory leak. 23-Apr-2024 11:16:18.358 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name: Apache Tomcat/9.0.85 23-Apr-2024 11:16:18.361 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built: Jan 5 2024 08:28:07 UTC 23-Apr-2024 11:16:18.361 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 9.0.85.0 23-Apr-2024 11:16:18.361 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux 23-Apr-2024 11:16:18.361 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 6.5.0-1019-oracle 23-Apr-2024 11:16:18.362 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64 23-Apr-2024 11:16:18.362 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /usr/lib/jvm/java-11-openjdk-amd64 23-Apr-2024 11:16:18.362 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 11.0.22+7-post-Ubuntu-0ubuntu222.04.1 23-Apr-2024 11:16:18.362 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Ubuntu 23-Apr-2024 11:16:18.362 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /dspace/runtime/apache-tomcat-9.0.85 23-Apr-2024 11:16:18.362 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /dspace/runtime/apache-tomcat-9.0.85 23-Apr-2024 11:16:18.383 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.lang=ALL-UNNAMED 23-Apr-2024 11:16:18.384 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.io=ALL-UNNAMED 23-Apr-2024 11:16:18.384 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.util=ALL-UNNAMED 23-Apr-2024 11:16:18.384 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.util.concurrent=ALL-UNNAMED 23-Apr-2024 11:16:18.384 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.rmi/sun.rmi.transport=ALL-UNNAMED 23-Apr-2024 11:16:18.385 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/dspace/runtime/tomcat/conf/logging.properties 23-Apr-2024 11:16:18.385 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager 23-Apr-2024 11:16:18.385 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048 23-Apr-2024 11:16:18.385 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources 23-Apr-2024 11:16:18.386 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027 23-Apr-2024 11:16:18.386 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dignore.endorsed.dirs= 23-Apr-2024 11:16:18.386 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/dspace/runtime/tomcat 23-Apr-2024 11:16:18.386 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/dspace/runtime/tomcat 23-Apr-2024 11:16:18.386 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/dspace/runtime/tomcat/temp 23-Apr-2024 11:16:18.388 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent The Apache Tomcat Native library which allows using OpenSSL was not found on the java.library.path: [/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib] 23-Apr-2024 11:16:18.852 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"] 23-Apr-2024 11:16:18.890 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [809] milliseconds 23-Apr-2024 11:16:18.964 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina] 23-Apr-2024 11:16:18.964 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/9.0.85] 23-Apr-2024 11:16:18.971 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/dspace/install/dspaceinstall_7.6.1/webapps/server] 23-Apr-2024 11:16:26.901 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time. 23-Apr-2024 11:16:45.767 SEVERE [main] org.apache.catalina.startup.HostConfig.deployDirectory Error deploying web application directory [/dspace/install/dspaceinstall_7.6.1/webapps/server] java.lang.IllegalStateException: Error starting child at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:686) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:658) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:661) at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1186) at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1941) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75) at java.base/java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:118) at org.apache.catalina.startup.HostConfig.deployDirectories(HostConfig.java:1096) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:478) at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:402) at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:345) at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:893) at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:794) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:171) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1332) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1322) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75) at java.base/java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:140) at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:866) at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:248) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:171) at org.apache.catalina.core.StandardService.startInternal(StandardService.java:433) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:171) at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:921) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:171) at org.apache.catalina.startup.Catalina.start(Catalina.java:772) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:347) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:478) Caused by: org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[/server]] at org.apache.catalina.util.LifecycleBase.handleSubClassException(LifecycleBase.java:419) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:186) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:683) ... 37 more Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'authenticationRestController': Unsatisfied dependency expressed through field 'converter'; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'converterService': Unsatisfied dependency expressed through field 'converters'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'workflowItemConverter' defined in file [/dspace/install/dspaceinstall_7.6.1/webapps/server/WEB-INF/classes/org/dspace/app/rest/converter/WorkflowItemConverter.class]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.dspace.app.rest.converter.WorkflowItemConverter]: Constructor threw exception; nested exception is java.lang.NullPointerException at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.resolveFieldValue(AutowiredAnnotationBeanPostProcessor.java:660) at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:640) at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:119) at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessProperties(AutowiredAnnotationBeanPostProcessor.java:399) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1431) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:619) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:542) at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:335) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:234) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:333) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:208) at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:955) at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:920) at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:583) at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:147) at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:731) at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:408) at org.springframework.boot.SpringApplication.run(SpringApplication.java:307) at org.springframework.boot.web.servlet.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:175) at org.springframework.boot.web.servlet.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:155) at org.springframework.boot.web.servlet.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:97) at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:174) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:4904) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:171) ... 38 more Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'converterService': Unsatisfied dependency expressed through field 'converters'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'workflowItemConverter' defined in file [/dspace/install/dspaceinstall_7.6.1/webapps/server/WEB-INF/classes/org/dspace/app/rest/converter/WorkflowItemConverter.class]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.dspace.app.rest.converter.WorkflowItemConverter]: Constructor threw exception; nested exception is java.lang.NullPointerException at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.resolveFieldValue(AutowiredAnnotationBeanPostProcessor.java:660) at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:640) at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:119) at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessProperties(AutowiredAnnotationBeanPostProcessor.java:399) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1431) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:619) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:542) at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:335) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:234) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:333) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:208) at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:276) at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1391) at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1311) at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.resolveFieldValue(AutowiredAnnotationBeanPostProcessor.java:657) ... 61 more Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'workflowItemConverter' defined in file [/dspace/install/dspaceinstall_7.6.1/webapps/server/WEB-INF/classes/org/dspace/app/rest/converter/WorkflowItemConverter.class]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.dspace.app.rest.converter.WorkflowItemConverter]: Constructor threw exception; nested exception is java.lang.NullPointerException at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:1334) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1232) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:582) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:542) at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:335) at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:234) at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:333) at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:208) at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:276) at org.springframework.beans.factory.support.DefaultListableBeanFactory.addCandidateEntry(DefaultListableBeanFactory.java:1609) at org.springframework.beans.factory.support.DefaultListableBeanFactory.findAutowireCandidates(DefaultListableBeanFactory.java:1573) at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveMultipleBeans(DefaultListableBeanFactory.java:1462) at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1349) at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1311) at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.resolveFieldValue(AutowiredAnnotationBeanPostProcessor.java:657) ... 75 more Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.dspace.app.rest.converter.WorkflowItemConverter]: Constructor threw exception; nested exception is java.lang.NullPointerException at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:224) at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:87) at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:1326) ... 89 more Caused by: java.lang.NullPointerException at org.dspace.app.rest.converter.AInprogressItemConverter.<init>(AInprogressItemConverter.java:63) at org.dspace.app.rest.converter.WorkflowItemConverter.<init>(WorkflowItemConverter.java:29) at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490) at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:211) ... 91 more 23-Apr-2024 11:16:45.772 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/dspace/install/dspaceinstall_7.6.1/webapps/server] has finished in [26,801] ms 23-Apr-2024 11:16:45.782 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"] 23-Apr-2024 11:16:45.890 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [27000] milliseconds 1,2 Top
