Anybody have any ideas why I'm running into this? I found this bug report https://jira.duraspace.org/browse/DS-2824 but don't understand how the issue was resolved in that case. Thanks.
On Thursday, February 28, 2019 at 3:27:27 PM UTC-5, David Baker wrote: > > I'm upgrading DSpace on Windows Server 2012 from version 5.3 to 6.3 > > Here's the output of bin\dspace database info: > > Using DSpace installation in: c:\dspace > > Database Type: postgres > Database URL: jdbc:postgresql://localhost:5432/dspace > Database Schema: public > Database Username: dspace > Database Software: PostgreSQL version 9.4.17 > Database Driver: PostgreSQL JDBC Driver version 42.2.1 > PostgreSQL 'pgcrypto' extension installed/up-to-date? true (version=1.1) > > > +----------------+-----------------------------------------------------+---------------------+---------+ > | Version | Description | > Installed on | State | > > +----------------+-----------------------------------------------------+---------------------+---------+ > | 1 | << Flyway Init >> | > 2015-06-09 12:16:21 | Baselin | > | 1.1 | Initial DSpace 1.1 database schema | > 2015-06-09 12:16:22 | Success | > | 1.2 | Upgrade to DSpace 1.2 schema | > 2015-06-09 12:16:22 | Success | > | 1.3 | Upgrade to DSpace 1.3 schema | > 2015-06-09 12:16:22 | Success | > | 1.3.9 | Drop constraint for DSpace 1 4 schema | > 2015-06-09 12:16:23 | Success | > | 1.4 | Upgrade to DSpace 1.4 schema | > 2015-06-09 12:16:23 | Success | > | 1.5 | Upgrade to DSpace 1.5 schema | > 2015-06-09 12:16:23 | Success | > | 1.5.9 | Drop constraint for DSpace 1 6 schema | > 2015-06-09 12:16:24 | Success | > | 1.6 | Upgrade to DSpace 1.6 schema | > 2015-06-09 12:16:24 | Success | > | 1.7 | Upgrade to DSpace 1.7 schema | > 2015-06-09 12:16:24 | Success | > | 1.8 | Upgrade to DSpace 1.8 schema | > 2015-06-09 12:16:24 | Success | > | 3.0 | Upgrade to DSpace 3.x schema | > 2015-06-09 12:16:24 | Success | > | 4.0 | Upgrade to DSpace 4.x schema | > 2015-06-09 12:16:24 | Success | > | 4.9.2015.10.26 | DS-2818 registry update > | | Ignored | > | 5.0.2014.08.08 | DS-1945 Helpdesk Request a Copy | > 2015-06-09 12:16:24 | Success | > | 5.0.2014.09.25 | DS 1582 Metadata For All Objects drop constraint | > 2015-06-09 12:16:24 | Success | > | 5.0.2014.09.26 | DS-1582 Metadata For All Objects | > 2015-06-09 12:16:24 | Success | > | 5.6.2016.08.23 | DS-3097 | > 2019-02-28 14:52:18 | Success | > | 5.7.2017.04.11 | DS-3563 Index metadatavalue resource type id column | > 2019-02-28 14:52:20 | Success | > | 5.7.2017.05.05 | DS 3431 Add Policies for BasicWorkflow | > 2019-02-28 14:52:21 | Success | > | 6.0.2015.03.06 | DS 2701 Dso Uuid Migration | > 2019-02-28 14:52:22 | Success | > | 6.0.2015.03.07 | DS-2701 Hibernate migration | > 2019-02-28 14:52:23 | Success | > | 6.0.2015.08.31 | DS 2701 Hibernate Workflow Migration | > 2019-02-28 14:54:57 | Success | > | 6.0.2016.01.03 | DS-3024 | > 2019-02-28 14:54:57 | Success | > | 6.0.2016.01.26 | DS 2188 Remove DBMS Browse Tables | > 2019-02-28 14:54:58 | Success | > | 6.0.2016.02.25 | DS-3004-slow-searching-as-admin > | | Pending | > | 6.0.2016.04.01 | DS-1955 Increase embargo reason > | | Pending | > | 6.0.2016.04.04 | DS-3086-OAI-Performance-fix > | | Pending | > | 6.0.2016.04.14 | DS-3125-fix-bundle-bitstream-delete-rights > | | Pending | > | 6.0.2016.05.10 | DS-3168-fix-requestitem item id column > | | Pending | > | 6.0.2016.07.21 | DS-2775 > | | Pending | > | 6.0.2016.07.26 | DS-3277 fix handle assignment > | | Pending | > | 6.0.2016.08.23 | DS-3097 > | | Pending | > | 6.1.2017.01.03 | DS 3431 Add Policies for BasicWorkflow > | | Pending | > > +----------------+-----------------------------------------------------+---------------------+---------+ > > > Then there's this in my dspace.log file: > > > 2019-02-28 14:54:58,834 INFO org.flywaydb.core.internal.command.DbMigrate > @ Migrating schema "public" to version 6.0.2016.02.25 - > DS-3004-slow-searching-as-admin > 2019-02-28 14:54:58,928 INFO > org.flywaydb.core.internal.dbsupport.JdbcTemplate @ DB: column "name" of > relation "epersongroup" does not exist, skipping > 2019-02-28 14:54:59,537 ERROR org.flywaydb.core.internal.command.DbMigrate > @ Migration of schema "public" to version 6.0.2016.02.25 - > DS-3004-slow-searching-as-admin failed! Changes successfully rolled back. > 2019-02-28 14:54:59,537 FATAL org.dspace.core.Context @ Cannot initialize > database via Flyway! > java.sql.SQLException: Flyway migration error occurred > at > org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:673) > at > org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:576) > at > org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:552) > at org.dspace.core.Context.<clinit>(Context.java:103) > at > org.dspace.app.util.AbstractDSpaceWebapp.register(AbstractDSpaceWebapp.java:74) > at > org.dspace.app.util.DSpaceWebappListener.contextInitialized(DSpaceWebappListener.java:31) > at > org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4792) > at > org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5256) > at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150) > at > org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:754) > at > org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:730) > at > org.apache.catalina.core.StandardHost.addChild(StandardHost.java:734) > at > org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1140) > at > org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1875) > at java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source) > at java.util.concurrent.FutureTask.run(Unknown Source) > at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) > at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) > at java.lang.Thread.run(Unknown Source) > Caused by: org.flywaydb.core.internal.dbsupport.FlywaySqlScriptException: > Migration V6.0_2016.02.25__DS-3004-slow-searching-as-admin.sql failed > --------------------------------------------------------------------- > SQL State : 23505 > Error Code : 0 > Message : ERROR: duplicate key value violates unique constraint > "epersongroup_unique_idx_name" > Detail: Key (name)=(COLLECTION_29_DEFAULT_READ) already exists. > Location : > org/dspace/storage/rdbms/sqlmigration/postgres/V6.0_2016.02.25__DS-3004-slow-searching-as-admin.sql > > (C:\Program Files\apache-tomcat-8.5.31\file:\C:\Program > Files\apache-tomcat-8.5.31\webapps\ROOT\WEB-INF\lib\dspace-api-6.3.jar!\org\dspace\storage\rdbms\sqlmigration\postgres\V6.0_2016.02.25__DS-3004-slow-searching-as-admin.sql) > Line : 26 > Statement : UPDATE epersongroup > SET name = > (SELECT text_value > FROM metadatavalue v > JOIN metadatafieldregistry field on v.metadata_field_id = > field.metadata_field_id > JOIN metadataschemaregistry s ON field.metadata_schema_id = > s.metadata_schema_id > WHERE s.short_id = 'dc' AND element = 'title' AND qualifier IS NULL > AND v.dspace_object_id = epersongroup.uuid LIMIT 1) > > at > org.flywaydb.core.internal.dbsupport.SqlScript.execute(SqlScript.java:117) > at > org.flywaydb.core.internal.resolver.sql.SqlMigrationExecutor.execute(SqlMigrationExecutor.java:71) > at > org.flywaydb.core.internal.command.DbMigrate.doMigrate(DbMigrate.java:352) > at > org.flywaydb.core.internal.command.DbMigrate.access$1100(DbMigrate.java:47) > at > org.flywaydb.core.internal.command.DbMigrate$4.doInTransaction(DbMigrate.java:308) > at > org.flywaydb.core.internal.util.jdbc.TransactionTemplate.execute(TransactionTemplate.java:72) > at > org.flywaydb.core.internal.command.DbMigrate.applyMigration(DbMigrate.java:305) > at > org.flywaydb.core.internal.command.DbMigrate.access$1000(DbMigrate.java:47) > at > org.flywaydb.core.internal.command.DbMigrate$2.doInTransaction(DbMigrate.java:230) > at > org.flywaydb.core.internal.command.DbMigrate$2.doInTransaction(DbMigrate.java:173) > at > org.flywaydb.core.internal.util.jdbc.TransactionTemplate.execute(TransactionTemplate.java:72) > at > org.flywaydb.core.internal.command.DbMigrate.migrate(DbMigrate.java:173) > at org.flywaydb.core.Flyway$1.execute(Flyway.java:959) > at org.flywaydb.core.Flyway$1.execute(Flyway.java:917) > at org.flywaydb.core.Flyway.execute(Flyway.java:1373) > at org.flywaydb.core.Flyway.migrate(Flyway.java:917) > at > org.dspace.storage.rdbms.DatabaseUtils.updateDatabase(DatabaseUtils.java:662) > ... 18 more > Caused by: org.postgresql.util.PSQLException: ERROR: duplicate key value > violates unique constraint "epersongroup_unique_idx_name" > Detail: Key (name)=(COLLECTION_29_DEFAULT_READ) already exists. > at > org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:2422) > at > org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:2167) > at > org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:306) > at > org.postgresql.jdbc.PgStatement.executeInternal(PgStatement.java:441) > at org.postgresql.jdbc.PgStatement.execute(PgStatement.java:365) > at > org.postgresql.jdbc.PgStatement.executeWithFlags(PgStatement.java:307) > at > org.postgresql.jdbc.PgStatement.executeCachedSql(PgStatement.java:293) > at > org.postgresql.jdbc.PgStatement.executeWithFlags(PgStatement.java:270) > at org.postgresql.jdbc.PgStatement.execute(PgStatement.java:266) > at > org.apache.commons.dbcp2.DelegatingStatement.execute(DelegatingStatement.java:291) > at > org.apache.commons.dbcp2.DelegatingStatement.execute(DelegatingStatement.java:291) > at > org.flywaydb.core.internal.dbsupport.JdbcTemplate.executeStatement(JdbcTemplate.java:238) > at > org.flywaydb.core.internal.dbsupport.SqlScript.execute(SqlScript.java:114) > > -- All messages to this mailing list should adhere to the DuraSpace Code of Conduct: https://duraspace.org/about/policies/code-of-conduct/ --- You received this message because you are subscribed to the Google Groups "DSpace Technical Support" group. 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