Hello Stuart,
On the advise of another user, I tried to run [dspace]/bin/index-init
(thanks Kim Shepard) ... this improved the situtaiton and I thought it
repaired the problem, but upon furhter inspection this only repaired the
subject search and author search.....the issue date and titles continues
to throw errors.....
Bellow is the full stack trace
thanks..David
org.apache.cocoon.ProcessingException: Failed to process pipeline
at <map:serialize type="xml"> -
file:/usr/local/tomcat5.5/webapps/xmlui/aspects/aspects.xmap:126:31
at <map:generate type="file"> -
file:/usr/local/tomcat5.5/webapps/xmlui/aspects/aspects.xmap:125:55
at <map:serialize type="xml"> -
resource://aspects/ArtifactBrowser/sitemap.xmap:219:35
at <map:transform type="CommunityViewer"> -
resource://aspects/ArtifactBrowser/sitemap.xmap:218:47
at <map:transform type="Navigation"> -
resource://aspects/ArtifactBrowser/sitemap.xmap:104:38
at <map:generate> -
resource://aspects/ArtifactBrowser/sitemap.xmap:92:19
at <map:serialize type="xml"> -
resource://aspects/Administrative/sitemap.xmap:824:31
at <map:transform type="Navigation"> -
resource://aspects/Administrative/sitemap.xmap:269:38
at <map:transform type="SystemwideAlerts"> -
resource://aspects/Administrative/sitemap.xmap:268:44
at <map:generate> -
resource://aspects/Administrative/sitemap.xmap:266:19
at <map:serialize type="xml"> -
resource://aspects/EPerson/sitemap.xmap:331:31
at <map:transform type="Navigation"> -
resource://aspects/EPerson/sitemap.xmap:136:38
at <map:generate> -
resource://aspects/EPerson/sitemap.xmap:125:19
at <map:serialize type="xml"> -
resource://aspects/Submission/sitemap.xmap:300:38
at <map:transform type="Navigation"> -
resource://aspects/Submission/sitemap.xmap:143:45
at <map:generate> -
resource://aspects/Submission/sitemap.xmap:140:26
at <map:serialize type="xml"> -
file:/usr/local/tomcat5.5/webapps/xmlui/aspects/aspects.xmap:115:34
at <map:transform type="PageNotFound"> -
file:/usr/local/tomcat5.5/webapps/xmlui/aspects/aspects.xmap:114:43
at <map:generate> -
file:/usr/local/tomcat5.5/webapps/xmlui/aspects/aspects.xmap:113:22
at <map:serialize type="xhtml"> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:18
4:34
at <map:transform type="NamespaceFilter"> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:18
1:84
at <map:transform type="NamespaceFilter"> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:18
0:78
at <map:transform type="i18n"> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:17
4:33
at <map:transform> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:17
0:44
at <map:transform type="IncludePageMeta"> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:15
5:45
at <map:generate type="file"> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/Reference/sitemap.xmap:13
1:55
at <map:mount> -
file:/usr/local/tomcat5.5/webapps/xmlui/themes/themes.xmap:63:45
at <map:mount> -
file:/usr/local/tomcat5.5/webapps/xmlui/sitemap.xmap:345:73
at
org.apache.cocoon.ProcessingException.throwLocated(ProcessingException.j
ava:144)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.handleE
xception(AbstractProcessingPipeline.java:951)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:381)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:779)
at
org.apache.cocoon.components.source.impl.SitemapSource.toSAX(SitemapSour
ce.java:412)
at
org.apache.cocoon.components.source.SourceUtil.toSAX(SourceUtil.java:100
)
at
org.apache.cocoon.components.source.SourceUtil.parse(SourceUtil.java:320
)
at
org.apache.cocoon.generation.FileGenerator.generate(FileGenerator.java:1
15)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:335)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:779)
at
org.apache.cocoon.components.source.impl.SitemapSource.toSAX(SitemapSour
ce.java:412)
at
org.apache.cocoon.components.source.SourceUtil.toSAX(SourceUtil.java:100
)
at
org.apache.cocoon.components.source.SourceUtil.parse(SourceUtil.java:320
)
at
org.apache.cocoon.generation.FileGenerator.generate(FileGenerator.java:1
15)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
XMLPipeline(AbstractProcessingPipeline.java:578)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:281)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:779)
at
org.apache.cocoon.components.source.impl.SitemapSource.toSAX(SitemapSour
ce.java:412)
at
org.apache.cocoon.components.source.SourceUtil.toSAX(SourceUtil.java:100
)
at
org.apache.cocoon.components.source.SourceUtil.parse(SourceUtil.java:320
)
at
org.apache.cocoon.generation.FileGenerator.generate(FileGenerator.java:1
15)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
XMLPipeline(AbstractProcessingPipeline.java:578)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:281)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:779)
at
org.apache.cocoon.components.source.impl.SitemapSource.toSAX(SitemapSour
ce.java:412)
at
org.apache.cocoon.components.source.SourceUtil.toSAX(SourceUtil.java:100
)
at
org.apache.cocoon.components.source.SourceUtil.parse(SourceUtil.java:320
)
at
org.apache.cocoon.generation.FileGenerator.generate(FileGenerator.java:1
15)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
XMLPipeline(AbstractProcessingPipeline.java:578)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:281)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:779)
at
org.apache.cocoon.components.source.impl.SitemapSource.toSAX(SitemapSour
ce.java:412)
at
org.apache.cocoon.components.source.SourceUtil.toSAX(SourceUtil.java:100
)
at
org.apache.cocoon.components.source.SourceUtil.parse(SourceUtil.java:320
)
at
org.apache.cocoon.generation.FileGenerator.generate(FileGenerator.java:1
15)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
XMLPipeline(AbstractProcessingPipeline.java:578)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:281)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:779)
at
org.apache.cocoon.components.source.impl.SitemapSource.toSAX(SitemapSour
ce.java:412)
at
org.apache.cocoon.components.source.SourceUtil.toSAX(SourceUtil.java:100
)
at
org.apache.cocoon.components.source.SourceUtil.parse(SourceUtil.java:320
)
at
org.apache.cocoon.generation.FileGenerator.generate(FileGenerator.java:1
15)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
XMLPipeline(AbstractProcessingPipeline.java:578)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:281)
at
org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process
(AbstractProcessingPipeline.java:480)
at
org.apache.cocoon.components.treeprocessor.sitemap.SerializeNode.invoke(
SerializeNode.java:120)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:46)
at
org.apache.cocoon.components.treeprocessor.sitemap.PreparableMatchNode.i
nvoke(PreparableMatchNode.java:130)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:68)
at
org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(P
ipelineNode.java:142)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:68)
at
org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(
PipelinesNode.java:92)
at
org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process
(ConcreteTreeProcessor.java:234)
at
org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process
(ConcreteTreeProcessor.java:176)
at
org.apache.cocoon.components.treeprocessor.TreeProcessor.process(TreePro
cessor.java:252)
at
org.apache.cocoon.components.treeprocessor.sitemap.MountNode.invoke(Moun
tNode.java:117)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:46)
at
org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(Matc
hNode.java:107)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:68)
at
org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(P
ipelineNode.java:142)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:68)
at
org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(
PipelinesNode.java:92)
at
org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process
(ConcreteTreeProcessor.java:234)
at
org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process
(ConcreteTreeProcessor.java:176)
at
org.apache.cocoon.components.treeprocessor.TreeProcessor.process(TreePro
cessor.java:252)
at
org.apache.cocoon.components.treeprocessor.sitemap.MountNode.invoke(Moun
tNode.java:117)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:68)
at
org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(P
ipelineNode.java:142)
at
org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.
invokeNodes(AbstractParentProcessingNode.java:68)
at
org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(
PipelinesNode.java:92)
at
org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process
(ConcreteTreeProcessor.java:234)
at
org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process
(ConcreteTreeProcessor.java:176)
at
org.apache.cocoon.components.treeprocessor.TreeProcessor.process(TreePro
cessor.java:252)
at org.apache.cocoon.Cocoon.process(Cocoon.java:686)
at
org.apache.cocoon.servlet.CocoonServlet.service(CocoonServlet.java:1153)
at
org.dspace.app.xmlui.cocoon.DSpaceCocoonServlet.service(DSpaceCocoonServ
let.java:245)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:803)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(Applica
tionFilterChain.java:269)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilt
erChain.java:188)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValv
e.java:213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValv
e.java:174)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java
:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java
:117)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.
java:108)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:1
74)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:87
4)
at
org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.proc
essConnection(Http11BaseProtocol.java:665)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint
.java:528)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollow
erWorkerThread.java:81)
at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool
.java:689)
at java.lang.Thread.run(Thread.java:595)
Caused by: org.postgresql.util.PSQLException: ERROR: current transaction
is aborted, commands ignored until end of transaction block
at
org.dspace.app.xmlui.cocoon.AbstractDSpaceTransformer.handleException(Ab
stractDSpaceTransformer.java:140)
at
org.dspace.app.xmlui.wing.AbstractWingTransformer.startElement(AbstractW
ingTransformer.java:279)
at
org.apache.cocoon.components.sax.XMLTeePipe.startElement(XMLTeePipe.java
:83)
at
org.apache.cocoon.xml.AbstractXMLPipe.startElement(AbstractXMLPipe.java:
94)
at
org.dspace.app.xmlui.wing.AbstractWingTransformer.startElement(AbstractW
ingTransformer.java:271)
at
org.apache.cocoon.components.EnvironmentChanger.startElement(Environment
Stack.java:139)
at
org.apache.cocoon.components.sax.XMLTeePipe.startElement(XMLTeePipe.java
:83)
at
org.apache.cocoon.components.sax.XMLByteStreamInterpreter.parse(XMLByteS
treamInterpreter.java:96)
at
org.apache.cocoon.components.sax.XMLByteStreamInterpreter.deserialize(XM
LByteStreamInterpreter.java:72)
at
org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipe
line.processXMLPipeline(AbstractCachingProcessingPipeline.java:333)
... 88 more
Caused by: org.postgresql.util.PSQLException: ERROR: current transaction
is aborted, commands ignored until end of transaction block
at
org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecu
torImpl.java:1531)
at
org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImp
l.java:1313)
at
org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:
188)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Stateme
nt.java:452)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.executeWithFlags(AbstractJdb
c2Statement.java:354)
at
org.postgresql.jdbc2.AbstractJdbc2Statement.executeQuery(AbstractJdbc2St
atement.java:258)
at
org.apache.commons.dbcp.DelegatingPreparedStatement.executeQuery(Delegat
ingPreparedStatement.java:93)
at
org.apache.commons.dbcp.DelegatingPreparedStatement.executeQuery(Delegat
ingPreparedStatement.java:93)
at
org.dspace.storage.rdbms.DatabaseManager.queryTable(DatabaseManager.java
:169)
at
org.dspace.content.Community.getSubcommunities(Community.java:577)
at
org.dspace.app.xmlui.aspect.artifactbrowser.CommunityViewer.addBody(Comm
unityViewer.java:271)
at
org.dspace.app.xmlui.wing.AbstractWingTransformer.startElement(AbstractW
ingTransformer.java:256)
David Marcinkowski
Associate Director
Academic Computing
Manhattan Campus
Pratt Institute
212-647-7761
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