Hello Dumux team,
Sorry for re-sending this but I just hope someone can help me.
I hope you're all doing great. I want to use an eclipse grid for my
dumux problem. It was indicated in the handbook I should install
opm-grid module. I had only the minimum dumux setup along with the
dumux-course module. So I first installed opm-common (dependency of
opm-grid) using this command:
(dunecontrol --module=opm-common all)
and then I installed opm-grid using this command
(dunecontrol --module=opm-grid all)
They both installed successfully. The versions of opm-common and
opm-grid I used for the installation are the master versions in the
following repositories:
https://github.com/OPM/opm-common
https://github.com/OPM/opm-grid
To check that everything is OK before I start my own module with my own
eclipse grid, I first tried to build the dumux example with the eclipse
grid located in dumux/test/porousmediumflow/2p/implicit/cornerpoint from
its build directory. However, I was faced with this error: The following
cmake condition is not met: HAVE-OPM-GRID
I then deleted all the build folders in all modules using these two
commands:
(rm -r d*/build-cmake)
(rm -r o*/build-cmake)
Then I ran dunecontrol again using this command:
(./dune-common/bin/dunecontrol --opts=dumux/cmake.opts all)
Again everything installed successfully. I tried to build the dumux
example with the eclipse grid again. It built successfully but when I
tried to run it using this command:
(./test_2p_cornerpoint params.input), I got the following error:
Reading parameters from file params.input.
Found PORO...
Found PERMX...
PERMZ not found, set equal to PERMX...
[mahmoud-Inspiron-N5110:120949] *** An error occurred in MPI_Barrier
[mahmoud-Inspiron-N5110:120949] *** reported by process [1393164289,0]
[mahmoud-Inspiron-N5110:120949] *** on communicator MPI_COMM_WORLD
[mahmoud-Inspiron-N5110:120949] *** MPI_ERR_COMM: invalid communicator
[mahmoud-Inspiron-N5110:120949] *** MPI_ERRORS_ARE_FATAL (processes in
this communicator will now abort,
[mahmoud-Inspiron-N5110:120949] *** and potentially your MPI job)
I have no clue what’s the problem. I have no problem building and
running other dumux examples. I just have the problem with this example
problem with the eclipse grid.
My OS is Ubuntu 20.04 LTS
My installed pre-requisites for dumux are the following:
- cmake version 3.16.3
- gcc (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0
- pkg-config version: 0.29.1
- Open MPI version:4.0.3
- paraview version 5.7.0
- Python 3.8.5
- git version 2.25.1
My installed dune modules are:
1) dumux Version: 3.2-git
2) dune-common Version: 2.7.1
3) dune-geometry Version 2.7.1
4) dune-grid Version: 2.7.1
5) dune-istl Version: 2.7.1
6) dune-localfunctions Version: 2.7.1
7) dumux-course Version: 2018
8) opm-common Version: 2021.04-pre
9) opm-grid Version: 2021.04-pre
Your help and advice to solve the issue are very highly appreciated.
Thanks in advance !
Best Regards,
Mahmoud Atef
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