Hi all, I am creating an eb for MapSplice http://www.netlab.uky.edu/p/bioinfo/MapSplice2 which brings its own versions if SamTools and bowtie. I could patch the Makefile to remove SamTools from being built and flag it as a dependency instead. But the bowtie version that is included seems special and old. I think it is best to keep it as it is.
In this case, I would have to make sure that MapSplice and bowtie are not loaded at the same time. How can I add this "custom conflict" line to the generated modules file? Thanks again for your help! Olaf
