Hi, Thanks for the info. I know it is late over there.
So, I know that, for the first option, you said to bootstrap-install without HierarchicalMNS. But I thought I would comment that out in the config.cfg file: #module-naming-scheme=HierarchicalMNS And then try “eb ./EasyBuild-2.0.0.eb” again. It worked, with a warning: "UserWarning: Module easybuild was already imported”. However, this install went in the “installpath” directory (which I had not yet defined when installing 1.16.1). Is this the normal/expected place for EasyBuild itself to be isntalled. In the same installpath directory tree as applications? Thanks, Todd From: Kenneth Hoste <[email protected]<mailto:[email protected]>> Reply-To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> List-Post: [email protected] Date: Monday, March 16, 2015 at 3:09 PM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: Re: [easybuild] v2.0.0 sanity check failure with Lmod Hi Todd, Thanks for sending me the log (off-list). This is the relevant bit, from the debug output of the "lmod python load Core/EasyBuild/2.0.0" command: Lmod has detected the following error: Cannot load module "Core/EasyBuild/2.0.0" because these modules are loaded: EasyBuild The problem is that you're using an EasyBuild module that was installed under the default module naming scheme, to install EasyBuild under HierarchicalMNS. When EB tries to load the newly generated module Core/EasyBuild/2.0.0 in the sanity check, the 'conflict EasyBuild' line kicks in in the loaded EasyBuild module. This fails only when Lmod is used, it should work with Tcl/C environment modules because of some trickery that is done in the EasyBuildMeta easyblock used to install EasyBuild with. I once started an attempt to resolve this issue (see https://github.com/hpcugent/easybuild-easyblocks/pull/428), by simply unloading the loade EasyBuild module, but never finished it (it's trickier than it sounds). You have a couple of options: * bootstrap EasyBuild v2.0.0 with having $EASYBUILD_MODULE_NAMING_SCHEME set to HierarchicalMNS, should work (let me know if it does) * remove/uncomment the 'conflict EasyBuild' line in the EasyBuild/1.16.1 module prior to loading it, and try installing EasyBuild-2.0.0.eb again * manually set $PATH and $PYTHONPATH to use the installation behind the EasyBuild/1.16.1 module (cfr. 'module show EasyBuild/1.16.1'), and try installing EasyBuild-2.0.0.eb again I hope to get back to working out a proper solution for this (the PR I referred to is dead/rotted). regards, Kenneth On 16/03/15 17:00, Heywood, Todd wrote: I tried installing EasyBuild v2.0.0 with EasyBuild v1.16.1, using the easyconfig file EasyBuild-2.0.0.eb. It fails on the sanity check with == sanity checking... /opt/hpc/lib/python2.7/site-packages/setuptools/command/install_scripts.py:3: UserWarning: Module easybuild was already imported from /sonas-hs/it/hpc/home/easybuild/easybuild/software/Core/EasyBuild/1.16.1/lib/python2.7/site-packages/easybuild_easyblocks-1.16.1-py2.7.egg/easybuild/__init__.pyc, but /sonas-hs/it/hpc/home/easybuild/easybuild/software/Core/EasyBuild/1.16.1/lib/python2.7/site-packages/easybuild_framework-1.16.1-py2.7.egg is being added to sys.path from pkg_resources import Distribution, PathMetadata, ensure_directory == FAILED: Installation ended unsuccessfully (build directory: /sonas-hs/it/hpc/home/easybuild/build/EasyBuild/2.0.0/dummy-dummy): build failed (first 300 chars): Changing environment as dictated by module failed: name 'false' is not defined (stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/sonas-hs/it/hpc/home/easybuild/install/modules/all/Core:/tmp/easybuild-kltRfC/tmpRTxxka/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all:/sonas-hs/it/hpc/home/easy == Results of the build can be found in the log file /tmp/easybuild-kltRfC/easybuild-EasyBuild-2.0.0-20150316.105656.qzouP.log ERROR: EasyBuild crashed with an error (at easybuild/easybuild/software/Core/EasyBuild/1.16.1/lib/python2.7/site-packages/easybuild_framework-1.16.1-py2.7.egg/easybuild/main.py:138 in build_and_install_software): Build of /sonas-hs/it/hpc/home/easybuild/tmp/EasyBuild-2.0.0.eb failed (err: 'build failed (first 300 chars): Changing environment as dictated by module failed: name \'false\' is not defined (stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/sonas-hs/it/hpc/home/easybuild/install/modules/all/Core:/tmp/easybuild-kltRfC/tmpRTxxka/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all:/sonas-hs/it/hpc/home/easy') From the log file (redundant): == 2015-03-16 10:59:00,773 main.environment INFO Environment variable MODULEPATH set to /sonas-hs/it/hpc/home/easybuild/install/modules/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all/Core:/sonas-hs/it/hpc/home/easybuild/easybuild/modules/all/Core == 2015-03-16 10:59:00,773 main.environment INFO Environment variable LMOD_DEFAULT_MODULEPATH set to /sonas-hs/it/hpc/home/easybuild/install/modules/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all/Core:/sonas-hs/it/hpc/home/easybuild/easybuild/modules/all/Core == 2015-03-16 10:59:00,774 main.environment INFO Environment variable _ModuleTable002_ set to 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 == 2015-03-16 10:59:01,225 main.Lmod INFO $MODULEPATH set based on list of module paths (via 'module use'): /tmp/easybuild-kltRfC/tmpRTxxka/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all/Core:/sonas-hs/it/hpc/home/easybuild/easybuild/modules/all/Core == 2015-03-16 10:59:01,451 main.easyblock WARNING build failed (first 300 chars): Changing environment as dictated by module failed: name 'false' is not defined (stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/sonas-hs/it/hpc/home/easybuild/install/modules/all/Core:/tmp/easybuild-kltRfC/tmpRTxxka/all:/sonas-hs/it/hpc/home/easybuild/install/modules/all:/sonas-hs/it/hpc/home/easy == 2015-03-16 10:59:01,452 main.EB_EasyBuildMeta INFO Closing log for application name EasyBuild version 2.0.0 Thanks, Todd
