Hello all, We are trying to build spglib-1.7.4-intel-2015b.eb using “eb —try-software-version=1.7.3 spglib-1.7.3-intel-2015b.eb”. The only change is the version number, but when trying to build it fails with:
main.easyblock WARNING build failed (first 300 chars): Can't change to real build directory /dev/shm/spglib/1.7.4/intel-2015b/spglib-1.7.4/spglib-1.7.4 This problem seems to be caused by filetools after the unpacking of the sources. If we use version spglib-1.7.3, we get: == 2015-10-06 10:39:15,250 main.ConfigureMake INFO Checksum verification for /apps/antwerpen/sources/s/spglib/spglib-1.7.3.tar.gz using None passed. == 2015-10-06 10:39:15,251 main.ConfigureMake INFO Running method extract_step part of step source == 2015-10-06 10:39:15,251 main.ConfigureMake INFO Unpacking source spglib-1.7.3.tar.gz == 2015-10-06 10:39:15,251 main.filetools DEBUG Not creating existing path /dev/shm/spglib/1.7.3/intel-2015b == 2015-10-06 10:39:15,251 main.filetools DEBUG Unpacking /apps/antwerpen/sources/s/spglib/spglib-1.7.3.tar.gz in directory /dev/shm/spglib/1.7.3/intel-2015b. == 2015-10-06 10:39:15,251 main.run DEBUG run_cmd: running cmd tar xzf /apps/antwerpen/sources/s/spglib/spglib-1.7.3.tar.gz (in /dev/shm/spglib/1.7.3/intel-2015b) == 2015-10-06 10:39:15,293 main.run DEBUG cmd "tar xzf /apps/antwerpen/sources/s/spglib/spglib-1.7.3.tar.gz" exited with exitcode 0 and output: == 2015-10-06 10:39:15,293 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) == 2015-10-06 10:39:15,294 main.filetools DEBUG Last dir list ['spglib-1.7.3', '._spglib-1.7.3'] == 2015-10-06 10:39:15,294 main.filetools DEBUG Possible new dir /dev/shm/spglib/1.7.3/intel-2015b found == 2015-10-06 10:39:15,294 main.ConfigureMake DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False == 2015-10-06 10:39:15,294 main.ConfigureMake INFO patching... == 2015-10-06 10:39:15,294 main.ConfigureMake INFO Starting patch step But with spglib-1.7.4, we get: == 2015-10-06 10:43:04,518 main.ConfigureMake INFO Checksum verification for /apps/antwerpen/sources/s/spglib/spglib-1.7.4.tar.gz using None passed. == 2015-10-06 10:43:04,518 main.ConfigureMake INFO Running method extract_step part of step source == 2015-10-06 10:43:04,518 main.ConfigureMake INFO Unpacking source spglib-1.7.4.tar.gz == 2015-10-06 10:43:04,519 main.filetools DEBUG Not creating existing path /dev/shm/spglib/1.7.4/intel-2015b == 2015-10-06 10:43:04,519 main.filetools DEBUG Unpacking /apps/antwerpen/sources/s/spglib/spglib-1.7.4.tar.gz in directory /dev/shm/spglib/1.7.4/intel-2015b. == 2015-10-06 10:43:04,519 main.run DEBUG run_cmd: running cmd tar xzf /apps/antwerpen/sources/s/spglib/spglib-1.7.4.tar.gz (in /dev/shm/spglib/1.7.4/intel-2015b) == 2015-10-06 10:43:04,558 main.run DEBUG cmd "tar xzf /apps/antwerpen/sources/s/spglib/spglib-1.7.4.tar.gz" exited with exitcode 0 and output: == 2015-10-06 10:43:04,558 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) == 2015-10-06 10:43:04,559 main.filetools DEBUG Last dir list ['test', 'src', 'README', 'python', 'NEWS', 'missing', 'Makefile.in', 'Makefile.am', 'm4', 'ltmain.sh', 'install-sh', 'INSTALL', 'example', 'depcomp', 'COPYING', 'configure.ac', 'configure', 'config.sub', 'config.h.in', 'config.guess', 'compile', 'ChangeLog', 'AUTHORS', 'aclocal.m4'] == 2015-10-06 10:43:04,559 main.filetools DEBUG Possible new dir /dev/shm/spglib/1.7.4/intel-2015b/spglib-1.7.4 found == 2015-10-06 10:43:04,559 main.ConfigureMake DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False == 2015-10-06 10:43:04,559 main.ConfigureMake INFO patching... == 2015-10-06 10:43:04,559 main.ConfigureMake INFO Starting patch step The only noticable difference between the two tar-files is that spglib-1.7.3.tar.gz also contains the file "./._spglib-1.7.3” which results in different behavior of "main.filetools DEBUG Possible new dir”. If I remove this file from the tarfile of spglib-1.7.3.tar.gz, I also get the same issue when trying to build it with EasyBuild. Any ideas how to recover from this issue? — Many thanks, Franky
easybuild-spglib-1.7.4-20151006.104304.DIgtf.log
Description: easybuild-spglib-1.7.4-20151006.104304.DIgtf.log
easybuild-spglib-1.7.3-20151006.103937.log
Description: easybuild-spglib-1.7.3-20151006.103937.log
