Can you post a full debug on gist or something? It is hard to say from that output what the problem might be since with make -j 32 the error could be quite a way back in the log.
I don't see why you would have had problem with boost 1.55 though. You are saying that the easybuild config for boost didnt' work? On Wed, Apr 20, 2016 at 8:40 AM Klima, Robert (NIH/NIAID) [C] < [email protected]> wrote: > Hi, > > I was able to successfully build Cufflinks 2.2.1 > using Cufflinks-2.2.1-goolf-1.7.20.eb with: > > dependencies = [ > ('Boost', '1.55.0'), > > After running submit script, I'm receiving the following error: > "cuffnorm: error while loading shared libraries: > libboost_thread.so.1.55.0: cannot open shared object file: No such file or > directory" > This is true, libboost_thread.so.1.55.0 file is missing. > > > Well, I changed Cufflinks-2.2.1-goolf-1.7.20.eb only to run: > dependencies = [ > ('Boost', '1.57.0'), > > The installation failed with errors: > == FAILED: Installation ended unsuccessfully (build directory: > /sysapps/cluster/build/Cufflinks/2.2.1/goolf-1.7.20): build failed (first > 300 chars): cmd " make -j 32 " exited with exitcode 2 and output: > make all-recursive > make[1]: Entering directory > `/sysapps/cluster/build/Cufflinks/2.2.1/goolf-1.7.20/cufflinks-2.2.1' > Making all in src > make[2]: Entering directory > `/sysapps/cluster/build/Cufflinks/2.2.1/goolf-1.7.20/cufflinks-2.2.1/src' > if g++ - > == Results of the build can be found in the log file > /tmp/eb-Og2D2j/easybuild-Cufflinks-2.2.1-20160419.162427.QEeOi.log > ERROR: Build of /nethome/klimarw/Cufflinks-2.2.1-goolf-1.7.20.eb failed > (err: 'build failed (first 300 chars): cmd " make -j 32 " exited with > exitcode 2 and output:\nmake all-recursive\nmake[1]: Entering directory > `/sysapps/cluster/build/Cufflinks/2.2.1/goolf-1.7.20/cufflinks-2.2.1\'\nMaking > all in src\nmake[2]: Entering directory > `/sysapps/cluster/build/Cufflinks/2.2.1/goolf-1.7.20/cufflinks-2.2.1/src\'\nif > g++ -') > > Do you have an idea how to correct the script/installation? > > Regards, > Robert > > -- > > *Robert Klima, Contractor* > > Sr. HPC Engineer - Linux and High Performance Computing Team > > National Institute of Allergy and Infectious Diseases > > SRA International Inc., A CSRA Company > > office 240 669 5514 mobile 202 657 7154 > > [email protected] <[email protected]> > > 5601 Fishers Lane > > Room 6A61B, MSC 9816 > > Bethesda, MD 20892-9816 > > > Disclaimer: The information in this e-mail and any of its attachments is > confidential and may contain sensitive information. It should not be used > by anyone who is not the original intended recipient. If you have received > this e-mail in error please inform the sender and delete it from your > mailbox or any other storage devices. National Institute of Allergy and > Infectious Diseases shall not accept liability for any statements made that > are sender's own and not expressly made on behalf of the NIAID by one of > its representatives. > > >
