Hi all, I am trying to install ROP from here: https://github.com/smangul1/rop/archive/1.0.2.tar.gz. I attached the .eb file I'm using. I get errors of the type
('rop-1.0.2/source/vprofile/G32965.GTEX-XAJ8-0726-SM-47JY5.3.unmapped_after_rRNA_virus_blastFormat6.csv',
'/apps/software/ROP/1.0.2-Python-2.7.11-foss-2015b/source/vprofile/G32965.GTEX-XAJ8-0726-SM-47JY5.3.unmapped_after_rRNA_virus_blastFormat6.csv',
"[Errno 2] No such file or directory:
'rop-1.0.2/source/vprofile/G32965.GTEX-XAJ8-0726-SM-47JY5.3.unmapped_after_rRNA_virus_blastFormat6.csv'"),
See attached .log file for full log.
Our install buildpath is in /apps/.tmp/, and there I can find the file that
should be copied, i.e this is the path to the existing file
/apps/.tmp/easybuild/builds/ROP/1.0.2/dummy-dummy-Python-2.7.11-foss-2015b/rop-1.0.2/source/vprofile/G32965.GTEX-XAJ8-0726-SM-47JY5.3.unmapped_after_rRNA_virus_blastFormat6.csv,
and the path it should copy to also exists:
ls /apps/software/ROP/1.0.2-Python-2.7.11-foss-2015b/source/vprofile/
extractViralReads2.py extractViralReads.py
G32965.GTEX-XAJ8-0726-SM-47JY5.3.unmapped_after_rRNA_virus_blastFormat6_filtered.csv
And it did copy some of the files to that folder.
Any idea what I am doing wrong?
Thanks,
Niek
ROP_1.0.2-Python-2.7.11-foss-2015b.eb
Description: Binary data
easybuild-HK9aos.log
Description: Binary data
