On 27/06/16 17:33, Yann Sagon wrote:
Hello Fotis,
thanks for your answer. What I was not getting was the versionsuffix
in the dependencies.
I have now created an eb file and it's waiting for approval. I hope
it's more or less correct:)
https://github.com/ysagon/easybuild-easyconfigs/blob/seqmagick/easybuild/easyconfigs/s/Seqmagick/Seqmgick-foss-2016a-Python-2.7.11.eb
PR (https://github.com/hpcugent/easybuild-easyconfigs/pull/3264) is
merged, thanks Yann!
For future reference: this is also documented at
http://easybuild.readthedocs.io/en/latest/Writing_easyconfig_files.html#dependencies,
although it may be a bit hard to find... I hope to work on making things
easier to find in the documentation in the near future.
regards,
Kenneth
2016-06-27 12:23 GMT+02:00 Fotis Georgatos <[email protected]
<mailto:[email protected]>>:
Hello Yann,
not sure this has been replied; you can find the proper notation
format in existing easyconfigs, for example here:
https://github.com/hpcugent/easybuild-easyconfigs/blob/master/easybuild/easyconfigs/h/HPCBIOS_Bioinfo/HPCBIOS_Bioinfo-20130829-goolf-1.4.10.ebhttps://github.com/hpcugent/easybuild-easyconfigs/blob/master/easybuild/easyconfigs/h/HPCBIOS_Bioinfo/HPCBIOS_Bioinfo-20130829-goolf-1.4.10.eb
F.
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*From:* [email protected]
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[[email protected]
<mailto:[email protected]>] on behalf of Yann Sagon
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*Sent:* Thursday, June 23, 2016 13:41
*To:* [email protected] <mailto:[email protected]>
*Subject:* [easybuild] python dependencies and toolchain
Hello,
I'm trying to create an eb file
(seqmgick-foss-2016a-Python-2.7.11.eb) to install seqmagick.
This soft depends on Biopython.
I want to indicate that I need a dependency on the existing
Biopython-1.65-foss-2016a-Python-2.7.11.eb but I don't know how to
indicate this in the dependencies pragma.
[1]
https://github.com/hpcugent/easybuild-easyconfigs/blob/master/easybuild/easyconfigs/b/Biopython/Biopython-1.65-foss-2016a-Python-2.7.11.eb
Thanks
--
Yann SAGON
Ingénieur système HPC
24 Rue du Général-Dufour
1211 Genève 4 - Suisse
Tél. : +41 (0)22 379 7737 <tel:%2B41%20%280%2922%20379%207737>
[email protected] <mailto:[email protected]> - www.unige.ch
<http://www.unige.ch>
--
Yann SAGON
Ingénieur système HPC
24 Rue du Général-Dufour
1211 Genève 4 - Suisse
Tél. : +41 (0)22 379 7737
[email protected] <mailto:[email protected]> - www.unige.ch
<http://www.unige.ch>
