I have written one also. bcl2fastq only seems to work with Boost 1.55. Please see: https://github.com/FredHutch/easybuild-life-sciences/
On Thu, Feb 16, 2017 at 4:39 PM, Robert Schmidt <[email protected]> wrote: > I have an easyconfig here: > > https://github.com/rjeschmi/eb-easyconfigs/blob/master/ > bcl2fastq2-v2.16.0.10-foss-2015a.eb > > I haven't checked it in a while. Maybe hop on IRC tomorrow and we can chat? > > On Thu, Feb 16, 2017 at 7:17 PM Siddiqui, Shahzeb < > [email protected]> wrote: > >> Hello, >> >> >> >> I need to install bcl2fastq2 for a user and I was wondering if someone >> can help me get this working in EasyBuild. It uses a configure make to >> install the package, with a slight variation. The configure script is >> placed in inside a “src” directory and it doesn’t build in current >> directory but it can be bypassed with –force-builddir. >> >> >> >> I have been able to install it with a custom easyblock, but I think the >> command “bcl2fastq” is not configured properly. I am not an expert on this >> tool so I have no way of testing it. >> >> >> >> Please see: https://github.com/hpcugent/easybuild-easyblocks/issues/1110 >> >> >> >> Thanks >> >> >> >> Shahzeb Siddiqui >> >> HPC Linux Engineer >> >> B2220-447.2 >> >> Groton, CT >> >> >> >
