Hello, I’m trying to install the package ROOT and bam-readcount. I have in the 2 scenarii the same error :
zlib is not statically linked in /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25-GCCcore-4.9.3/bin/addr2line: \tlinux-vdso.so.1 I’m working on scientific linux 7 with bright cluster manager 7.1.3 Do you have any ideas ? Thanks in advance Best regards Raphaël [email protected] ~ $ eb --modules-tool EnvironmentModulesC --module-syntax Tcl ROOT-v6.08.02-foss-2016a-Python-2.7.11.eb --debug --robot == temporary log file in case of crash /tmp/eb-glj9Ho/easybuild-WxarAN.log == resolving dependencies ... == processing EasyBuild easyconfig /cm/shared/apps/easyb/software/EasyBuild/3.1.1/lib/python2.7/site-packages/easybuild_easyconfigs-3.1.1-py2.7.egg/easybuild/easyconfigs/b/binutils/binutils-2.25-GCCcore-4.9.3.eb == building and installing binutils/2.25-GCCcore-4.9.3... == fetching files... == creating build dir, resetting environment... == unpacking... == patching... == preparing... == FAILED: Installation ended unsuccessfully (build directory: /cm/shared/apps/easyb/.local/easybuild/build/binutils/2.25/GCCcore-4.9.3): build failed (first 300 chars): zlib/1.2.8-GCCcore-4.9.3(15):ERROR:150: Module 'zlib/1.2.8-GCCcore-4.9.3' conflicts with the currently loaded module(s) 'zlib/1.2.8-GCC-4.9.3-binutils-2.25' == Results of the build can be found in the log file(s) /tmp/eb-glj9Ho/easybuild-binutils-2.25-20170919.124239.qnfWI.log ERROR: Build of /cm/shared/apps/easyb/software/EasyBuild/3.1.1/lib/python2.7/site-packages/easybuild_easyconfigs-3.1.1-py2.7.egg/easybuild/easyconfigs/b/binutils/binutils-2.25-GCCcore-4.9.3.eb failed (err: "build failed (first 300 chars): zlib/1.2.8-GCCcore-4.9.3(15):ERROR:150: Module 'zlib/1.2.8-GCCcore-4.9.3' conflicts with the currently loaded module(s) 'zlib/1.2.8-GCC-4.9.3-binutils-2.25'") [email protected] ~ $ module del zlib [email protected] ~ $ eb --modules-tool EnvironmentModulesC --module-syntax Tcl ROOT-v6.08.02-foss-2016a-Python-2.7.11.eb --debug --robot == temporary log file in case of crash /tmp/eb-SK0HCJ/easybuild-Ps7GtC.log == resolving dependencies ... == processing EasyBuild easyconfig /cm/shared/apps/easyb/software/EasyBuild/3.1.1/lib/python2.7/site-packages/easybuild_easyconfigs-3.1.1-py2.7.egg/easybuild/easyconfigs/b/binutils/binutils-2.25-GCCcore-4.9.3.eb == building and installing binutils/2.25-GCCcore-4.9.3... == fetching files... == creating build dir, resetting environment... == unpacking... == patching... == preparing... == configuring... == building... == testing... == installing... == taking care of extensions... == postprocessing... == sanity checking... == FAILED: Installation ended unsuccessfully (build directory: /cm/shared/apps/easyb/.local/easybuild/build/binutils/2.25/GCCcore-4.9.3): build failed (first 300 chars): zlib is not statically linked in /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25-GCCcore-4.9.3/bin/addr2line: linux-vdso.so.1 => (0x00002aaaaaaab000) libbfd-2.25.so => /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25/lib/libbfd-2.25.so (0x00002aaaaaaaf000) libdl.so.2 = == Results of the build can be found in the log file(s) /tmp/eb-SK0HCJ/easybuild-binutils-2.25-20170920.101407.UDoYn.log ERROR: Build of /cm/shared/apps/easyb/software/EasyBuild/3.1.1/lib/python2.7/site-packages/easybuild_easyconfigs-3.1.1-py2.7.egg/easybuild/easyconfigs/b/binutils/binutils-2.25-GCCcore-4.9.3.eb failed (err: 'build failed (first 300 chars): zlib is not statically linked in /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25-GCCcore-4.9.3/bin/addr2line: \tlinux-vdso.so.1 => (0x00002aaaaaaab000)\n\tlibbfd-2.25.so => /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25/lib/libbfd-2.25.so (0x00002aaaaaaaf000)\n\tlibdl.so.2 =') [email protected] ~ $ eb --modules-tool EnvironmentModulesC --module-syntax Tcl bam-readcount-0.7.4-foss-2015b.eb --debug --robot == temporary log file in case of crash /tmp/eb-p215XL/easybuild-nenZXv.log == resolving dependencies ... == processing EasyBuild easyconfig /cm/shared/apps/easyb/software/EasyBuild/3.1.1/lib/python2.7/site-packages/easybuild_easyconfigs-3.1.1-py2.7.egg/easybuild/easyconfigs/b/binutils/binutils-2.25-GCC-4.9.3-binutils-2.25.eb == building and installing binutils/2.25-GCC-4.9.3-binutils-2.25... == fetching files... == creating build dir, resetting environment... == unpacking... == patching... == preparing... == configuring... == building... == testing... == installing... == taking care of extensions... == postprocessing... == sanity checking... == FAILED: Installation ended unsuccessfully (build directory: /cm/shared/apps/easyb/.local/easybuild/build/binutils/2.25/GCC-4.9.3-binutils-2.25): build failed (first 300 chars): zlib is not statically linked in /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25-GCC-4.9.3-binutils-2.25/bin/addr2line: linux-vdso.so.1 => (0x00002aaaaaaab000) libbfd-2.25.so => /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25/lib/libbfd-2.25.so (0x00002aaaaaaaf000) li == Results of the build can be found in the log file(s) /tmp/eb-p215XL/easybuild-binutils-2.25-20170920.103001.ZnWiI.log ERROR: Build of /cm/shared/apps/easyb/software/EasyBuild/3.1.1/lib/python2.7/site-packages/easybuild_easyconfigs-3.1.1-py2.7.egg/easybuild/easyconfigs/b/binutils/binutils-2.25-GCC-4.9.3-binutils-2.25.eb failed (err: 'build failed (first 300 chars): zlib is not statically linked in /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25-GCC-4.9.3-binutils-2.25/bin/addr2line: \tlinux-vdso.so.1 => (0x00002aaaaaaab000)\n\tlibbfd-2.25.so => /cm/shared/apps/easyb/.local/easybuild/software/binutils/2.25/lib/libbfd-2.25.so (0x00002aaaaaaaf000)\n\tli') Raphaël Philippart Opérations : Systèmes SeGI - Université de Liège Allée de la Découverte, 8 Quartier Polytech 1 - Bâtiment B26 4000 Liège Phone +32-4-366 4981 Fax +32-4-366 2920 Email [email protected]
