Dear Jakob, issue https://github.com/easybuilders/easybuild-easyconfigs/issues/6953 may be relevant.
In that case, building LibTIFF without --enable-ld-version-script solved the problem. Miguel On Thu, Oct 18, 2018 at 7:17 PM Jakob Schiøtz <[email protected]> wrote: > Hi, > > I am trying to make easyconfigs for scikit-image and Pillow with > intel/2018b. For previous versions, the foss and intel easyconfigs are > identical (a part from the toolchain), so I just copied the foss version > and tried it. > > Compiling Pillow fails with this error: > > icc -shared > -L/home/modules/software/icc/2018.3.222-GCC-7.3.0-2.30/lib/intel64 > -L/home/modules/software/imkl/2018.3.222-iimpi-2018b/lib [ ... lots of -L > elided ... ] -ljpeg -lz -ltiff -lpython3.6m -o > build/lib.linux-x86_64-3.6/PIL/_imaging.cpython-36m-x86_64-linux-gnu.so > > /home/niflheim/schiotz/easybuild_experimental/sandybridge/software/LibTIFF/4.0.9-GCCcore-7.3.0/lib/libtiff.so:(*IND*+0x0): > multiple definition of `_end' > > /home/niflheim/schiotz/easybuild_experimental/sandybridge/software/LibTIFF/4.0.9-GCCcore-7.3.0/lib/libtiff.so:(*IND*+0x0): > multiple definition of `_edata' > > /home/niflheim/schiotz/easybuild_experimental/sandybridge/software/LibTIFF/4.0.9-GCCcore-7.3.0/lib/libtiff.so:(*IND*+0x0): > multiple definition of `__bss_start' > error: command 'icc' failed with exit status 1 > > It looks like something is wrong with the LibTIFF installation, which was > built as a prerequisite. I cannot help noticing that with the 2018b > toolchains it has been moved to the GCCcore-7.3.0 toolchain instead of > intel/foss 2017b for the previous versions. Could that have any influence > on this problem? > > And can anyone suggest a solution? > > Best regards > > Jakob > > -- > Jakob Schiøtz, professor, Ph.D. > Department of Physics > Technical University of Denmark > DK-2800 Kongens Lyngby, Denmark > http://www.fysik.dtu.dk/~schiotz/ > > > >
