Dear Loris,
On 05/12/2019 12:49, Loris Bennett wrote:
Hi John,
The packages are
inline
loo
StanHeaders
rstan
I have tried adding
'installopts': '--configure-args="CXXFLAGS=\\"$CXXFLAGS -DSTAN_THREADS\\""',
to both StanHeaders and rstan packages, but there is no effect on the
options actually passed to the compiler.
Can you share the full easyconfig file you're using for this?
regards,
Kenneth
Cheers,
Loris
John Dey <[email protected]> writes:
Which R package were you trying to install?
On Fri, Nov 15, 2019 at 1:52 AM Loris Bennett <[email protected]>
wrote:
Hi,
I am trying to install
RStan-2.18.2-foss-2018b-R-3.5.1.eb
with the additional compiler flag:
-DSTAN_THREADS
I want to us a hook and tried
def pre_configure_hook(self, *args, **kwargs):
"""Pre-build hook"""
# Build RStan with threading
##################################################
if self.name == 'RStan':
self.cfg['buildopts'] = self.cfg['buildopts'] \
+ 'CXXFLAGS="$CXXFLAGS -DSTAN_THREADS"'
self.log.info("[pre-build hook] Added -DSTAN_THREADS to CXXFLAGS to
buildopts")
return
In the log file I can see that the hooks is called, but the flag
doesn't seem to be used.
What am I doing wrong?
Cheers,
Loris
--
Dr. Loris Bennett (Mr.)
ZEDAT, Freie Universität Berlin Email [email protected]
