Hi Yann, In your log file the software depending on MPI are in the directory
/opt/ebsofts/MPI/GCC-CUDA whereas your EBROOTBOOST points to /opt/ebsofts/MPI/GCC Could this be the source of your problem? Sam On Fri, Apr 17, 2020 at 11:54 AM Yann Sagon <yann.sa...@unige.ch> wrote: > Hello, > Le 17.04.2020 à 10:26, Kenneth Hoste a écrit : > > > This looks like a Boost module that was not installed with EasyBuild, or > was it? > > Does it define the $EBROOTBOOST environment variable? If not, that > explains why "get_software_root" is failing for Boost... > > ml show Boost > --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- > /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0.lua: > --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- > help([[ > Description > =========== > Boost provides free peer-reviewed portable C++ source libraries. > > > More information > ================ > - Homepage: http://www.boost.org/ > ]]) > whatis("Description: Boost provides free peer-reviewed portable C++ source > libraries.") > whatis("Homepage: http://www.boost.org/";) > conflict("Boost") > prepend_path("CPATH","/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0/include") > prepend_path("LD_LIBRARY_PATH","/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0/lib") > prepend_path("LIBRARY_PATH","/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0/lib") > setenv("EBROOTBOOST","/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0") > setenv("EBVERSIONBOOST","1.67.0") > setenv("EBDEVELBOOST","/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-Boost-1.67.0-easybuild-devel") > setenv("BOOST_ROOT","/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0") > > == 2019-06-06 14:02:15,378 easyblock.py:278 INFO This is EasyBuild 3.9.0 > (framework: 3.9.0, easyblocks: 3.9.0) on host master.cluster. > > As this version of Boost was installed on our old server with CentOS6, I > rebuilt it right now on CentOS7 just in case. > > [sagon@node025 f] $ ml show Boost > --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- > /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Boost/1.67.0.lua: > --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- > help([[ > Description > =========== > Boost provides free peer-reviewed portable C++ source libraries. > > > More information > ================ > - Homepage: http://www.boost.org/ > ]]) > whatis("Description: Boost provides free peer-reviewed portable C++ source > libraries.") > whatis("Homepage: http://www.boost.org/";) > whatis("URL: http://www.boost.org/";) > conflict("Boost") > prepend_path("CPATH","/opt/ebsofts/Boost/1.67.0-foss-2018b/include") > prepend_path("LD_LIBRARY_PATH","/opt/ebsofts/Boost/1.67.0-foss-2018b/lib") > prepend_path("LIBRARY_PATH","/opt/ebsofts/Boost/1.67.0-foss-2018b/lib") > setenv("EBROOTBOOST","/opt/ebsofts/Boost/1.67.0-foss-2018b") > setenv("EBVERSIONBOOST","1.67.0") > setenv("EBDEVELBOOST","/opt/ebsofts/Boost/1.67.0-foss-2018b/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-Boost-1.67.0-easybuild-devel") > setenv("BOOST_ROOT","/opt/ebsofts/Boost/1.67.0-foss-2018b") > > you can see it is now installed with fixed-installdir-naming-scheme = 1, > it wasn't the case for the previous build. > > I tried to rebuild FSL and I got the same error message. > > Here is the log with the debug flag: > https://gist.github.com/ysagon/428b4ecc12a6499c41ab147dd456405e/raw/f52133077c309387a981015434bd9557e45404d5/FSL-6.0.2-foss-2018b-Python-2.7.15-CUDA-9.2.88.eb > > Best > >
