Hi,

I had the same issue for another Python bundle (and I was using --robot)

== restore after iterating...
== postprocessing...
== sanity checking...
== ... (took 11 secs)
== FAILED: Installation ended unsuccessfully (build directory: 
/dev/shm/ebbuild/Spyder/4.1.5/foss-2020a-Python-3.8.2): build failed (first 300 
chars): `pip check` failed:
spyder 4.1.5 requires intervaltree, which is not installed.

The reason is probably that some python packages updated their dependencies and the eb should be update as well.

Best

Yann


Le 18.10.2021 à 13:46, Strube, Alexandre a écrit :
Hola Joaquim,

dependencies are dealt with --robot setting - which should bring the right ones.

In any case, you can always install h5py beforehand yourself.

On 18. Oct 2021, at 12:26, Joaquim Jornet Somoza <j.jornet.som...@gmail.com <mailto:j.jornet.som...@gmail.com>> wrote:

Dear easybuilders,

I am trying to install Biopython-1.78-intel-2020a-Python-3.8.2.eb, but after the installation and
postprocessing, the sanity check step fails.

I have found this error that I don't know how to avoid:

== 2021-10-18 12:21:38,634 build_log.py:169 ERROR EasyBuild crashed with an error (at easybuild/common/software/EasyBuild/4.4.1/lib/python2.7/site-packages/easybuild/base/exceptions.py:124 in __init__): `pip check` failed:
yaff 1.4.2 requires h5py, which is not installed.

Could anyone help me?


Best regards
quim

--
----------------------------------------------------------------------------------------------------------------------------------------
*Dr. Joaquim Jornet Somoza*
*Técnico Superior de Cálculo Científico *
Servicios Generales a la Investigación (*SGIker*)
Universidad del País Vasco (*UPV/EHU*)
email: j.jornet.som...@gmail.com <mailto:j.jornet.som...@gmail.com>
Edificio Joxe Maria Korta (Campus Gipuzkoa)
Av. Tolosa 72, 4a planta
20018 Donostia-San Sebastián,
Gipuzkoa, Spain

/External Collaborator./
Nano-Bio Spectroscopy group
Departamento de Física de Materiales
Universidad del País Vasco (UPV/EHU)
Donostia-San Sebastián, Gipuzkoa, Spain

The Max Planck Institute for the Structure and Dynamics of Matter (MPSD)
Bldg. 99 (CFEL)
Luruper Chaussee 149
22761 Hamburg, Germany

--

Logo UNIGE      Yann Sagon
Référent HPC

Division du système et des technologies de l'information et de la communication
Université de Genève | 24 rue Général-Dufour
Tél 022 379 77 37 | Bureau 151

www.unige.ch/stic <http://www.unige.ch/stic>

Reply via email to