Hi, With
eb netcdf4-python-1.6.1-foss-2022a.eb --robot I get the following error Installing collected packages: netCDF4 Successfully installed netCDF4-1.6.1 == 2023-06-27 13:29:04,508 run.py:236 INFO running cmd: export PYTHONPATH=/tmp/eb-pmpi8f7m/tmpuf_ykzs8/lib/python3.10/site-packages:$PYTHONPATH && cd test && mpirun -n 1 /trinity/shared/easybuild/software/Python/3.10.4-GCCcore-11.3.0/bin/python run_all.py == 2023-06-27 13:29:07,652 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/software/EasyBuild/4.7.2/lib/python3.6/site-packages/easybuild/base/ex ceptions.py:126 in __init__): cmd "export PYTHONPATH=/tmp/eb-pmpi8f7m/tmpuf_ykzs8/lib/python3.10/site-packages:$PYTHONPATH && cd test && mpirun -n 1 /trinity/shared/ easybuild/software/Python/3.10.4-GCCcore-11.3.0/bin/python run_all.py " exited with exit code 139 and output: [admin:154447] *** Process received signal *** [admin:154447] Signal: Segmentation fault (11) [admin:154447] Signal code: (-6) [admin:154447] Failing at address: 0x41f00025b4f [admin:154447] [ 0] /lib64/libpthread.so.0(+0xf630)[0x2aaaab7d0630] [admin:154447] [ 1] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/openmpi/mca_btl_ofi.so(mca_btl_ofi_context_finalize+0x48)[0x2aabfd090f68] [admin:154447] [ 2] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/openmpi/mca_btl_ofi.so(mca_btl_ofi_context_alloc_scalable+0x228)[0x2aabfd091338] [admin:154447] [ 3] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/openmpi/mca_btl_ofi.so(+0x3ee0)[0x2aabfd08dee0] [admin:154447] [ 4] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/libopen-pal.so.40(mca_btl_base_select+0x102)[0x2aaab381ca32] [admin:154447] [ 5] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/openmpi/mca_bml_r2.so(mca_bml_r2_component_init+0x13)[0x2aabfd07fe33] [admin:154447] [ 6] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/libmpi.so.40(mca_bml_base_init+0x82)[0x2aaab339fc42] [admin:154447] [ 7] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/libmpi.so.40(ompi_mpi_init+0x68f)[0x2aaab33e00cf] [admin:154447] [ 8] /trinity/shared/easybuild/software/OpenMPI/4.1.4-GCC-11.3.0/lib/libmpi.so.40(PMPI_Init_thread+0x99)[0x2aaab33840e9] [admin:154447] [ 9] /trinity/shared/easybuild/software/SciPy-bundle/2022.05-foss-2022a/lib/python3.10/site-packages/mpi4py/MPI.cpython-310-x86_64-linux-gnu.so(+0xe783 d)[0x2aabf78db83d] [admin:154447] [10] /trinity/shared/easybuild/software/Python/3.10.4-GCCcore-11.3.0/lib/libpython3.10.so.1.0(PyModule_ExecDef+0x6f)[0x2aaaaae7c73f] ... There seems to be some issue with our fabric. Does anyone have an idea what might be causing this or where to look? Cheers, Loris -- Dr. Loris Bennett (Herr/Mr) ZEDAT, Freie Universität Berlin
