I have created a bug to track this problem:  
http://sourceforge.net/tracker/index.php?func=detail&aid=1664776&group_id=86829&atid=581073

Joe Mather wrote:
> Craig and Markus,
>
> I am using the project folder as the source and output
> folder.  That is, my directory/file structure looks like
> this...
>
>       <workspace>/<project>/.processed/
>       <workspace>/<project>/.settings/
>       <workspace>/<project>/com/
>       <workspace>/<project>/deployed/
>       <workspace>/<project>/verified/
>       <workspace>/<project>/.classpath
>       <workspace>/<project>/.eclipseme
>       <workspace>/<project>/.project
>       <workspace>/<project>/1.png
>       <workspace>/<project>/2.png
>       ...
>
> where the "com" directory contains all my source code.
>
> Apparently, the problem I had was caused by the
> ".processed" directory being compiled directly (hence the
> mismatched package names) during the build process.
>
> I added the ".processed" directory to the list of
> exclusions, and now the project builds.
>
> FYI.  To exclude the ".processed" directory: Right click on
> the project in Package Explorer.  Choose Properties. 
> Choose Java Build Path.  Choose the Source tab.  Expand the
> project in the tree view (if necessary). Highlight
> "Excluded" and choose Edit.  In the Exclusion Patterns
> section at the bottom, choose Add.  Enter ".processed/" as
> the pattern.
>
> Thanks for your help!
>
> --Joe
>
>
> --- Craig Setera <[EMAIL PROTECTED]> wrote:
>
>   
>> Markus,
>>
>> Are you saying you have problems if you use the project
>> folder as the 
>> source folder?  I suppose that is quite likely.  I'm not
>> a big fan of 
>> that organization and I never set things up that way. 
>> Therefore, I 
>> never think to test with that setup.
>>
>> Joe,
>>
>> Can you confirm you are trying to use the project as the
>> src and output 
>> folder?  Can you try it with src/bin folders?
>>
>> Thanks,
>> Craig
>>
>>     

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