Dear Colleagues:

We are pleased to announce a major round of improvements to the Neotoma Paleoecology Database (www.neotomadb.org <http://www.neotomadb.org/>), an international collaborative multiproxy database for the Quaternary and Pliocene. Currently, Neotoma contains data from the Global Pollen Database and Faunmap, a database of Quaternary mammals. Data from other collaborative databases are coming soon. Improvements to the initial database design and web interface were prioritized in a workshop in September, 2010. Further improvements are underway and coming soon.

Major improvements include:

   * Website relaunch. The Neotoma webpage has been completely
     redesigned and relaunched, and includes introductory pages for the
     scientific working groups that are collaborating with Neotoma
     (e.g. pollen, diatoms, ostracodes, insects, peatlands, plant
     macrofossils, middens, geochemistry...) and a News column with
     recent development highlights
   * Stratigraphic Diagrams! Neotoma Explorer now features interactive
     stratigraphic diagramming, allowing e.g. pollen diagrams to be
     quickly generated. When viewing a paleoecological dataset, select
     the "Diagram" tab to try out the new tool. Users may customize the
     y-axis, taxa grouping, and 5x exaggeration options. Also, mousing
     over the plot lines will display the underlying abundance data
     values.
   * Mapped clusters. To handle the display of large datasets on the
     Neotoma Explorer map interface, areas with dense site networks are
     now mapped as clusters.  These clusters will resolve into
     individual sites as the viewer zooms in to a particular region.

Coming soon:

   * A 'holding tank' that can be a temporary and publicly accessible
     web page for datasets that are being processed for incorporation
     into the relational database.  The larger goal is to minimize the
     time lag between when data is submitted to Neotoma and when it
     becomes publicly available.
   * Enhanced search tools for Neotoma Explorer.
   * Additional datasets from the ostracode, diatom, pollen, plant
     macrofossil and midden communities.
   * Creating a citation database for papers that cite Neotoma and its
     constituent datasets

Neotoma Phase II development is funded by a 5-year grant from the Geoinformatics Program of the U.S. National Science Foundation, with additional funding from the World Universities Network. We thank these supporters and all who are contributing to Neotoma Phase II.

Sincerely,

Allan C. Ashworth, [email protected] <mailto:[email protected]>
Jessica L. Blois, [email protected] <mailto:[email protected]>
Robert K. Booth, [email protected] <mailto:[email protected]>

Donald F. Charles. [email protected] <mailto:[email protected]>

Russell W. Graham, [email protected] <mailto:[email protected]>

Eric C. Grimm, [email protected] <mailto:[email protected]>

Stephen T. Jackson, [email protected] <mailto:[email protected]>

Alison J. Smith, [email protected] <mailto:[email protected]>

Jack W. Williams, [email protected] <mailto:[email protected]>

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