You will find that the method you use will be dependent on the
question you are asking.  If this is an inventory, then presence
absence data or presence only data can be used to model occupancy
using the programs presence or mark.  However, if you are in need of
abundance info as well, to some degree occupancy can give you this,
however, you can also use relative abundance.  The fact that the
amphibians live in the leaf litter should not make any difference.
There is an excellent publication by Smithsonian Instution Press
called Standard Methods for Inventory and Monitoring of Amphibians.
Its a pretty good, although already dated in some areas, reference.
Generally, you can use quadrat sampling, linear transects, etc., or
even combos of these.  pitfalls, drift fence arrays, and cover boards
are also very useful.

There are many good references out there, you just need to dig into
the literature on amphibians and reptiles.  Also, to some degree
insect methods may be useful.

Malcolm McCallum
Department Molecular Biology and Biochemistry
University of Missouri Kansas City
Managing Editor, Herpetological Conservation and Biology

On Sun, Oct 23, 2011 at 10:17 AM, Eric Flores <[email protected]> wrote:
> Hi all
>
> Would like to receive your advice related to the best method to assess
> amphibians in order to have a population estimate.
> A friend suggested me to use DISTANCE but some reference indicates this is
> not the best method when applied to amphibians that dwell on the leaf litter.
>
> Thanks
>
> Eric Flores
>



-- 
Malcolm L. McCallum
Department of Molecular Biology and Biochemistry
School of Biological Sciences
University of Missouri at Kansas City

Managing Editor,
Herpetological Conservation and Biology

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