Jason,

I’m going to have to heartily agree here. My first thought, when you ask how to 
“analyze” your data, is that this is a fairly broad term, and the answer will 
depend entirely on what your question is. I would encourage you to think in 
terms of parameter estimations. At the end, you will have a number (or several) 
that describes your results. A G statistic (or t, or Chi-sq, or a p-value, for 
that matter) is not very informative. A slope of a relationship between two 
variables (or a difference between two means, or a probability of some event 
occurring), on the other hand, is quite informative. So think in terms of a 
somewhat skeptical audience, who, if told, “there is a difference,” will 
immediately respond, “but how large of a difference?” Being able to answer that 
question should guide you in producing the most appropriate model.

Cheers
Matt Talluto

On Feb 12, 2014, at 21:41, David Schneider <[email protected]> wrote:

> Hello Jason,
> The 21st century approach to percent and count data
> is to write the model, not search for the 'right test.' 
> 
> In my experience it is possible for 4th year undergrads
> and 1st year grad students, with little stats experience,
> to learn this approach.
> 
> Statistical analysis based on writing the statistical model 
> can be carried out in almost all stat packages,
> including SPSS and Minitab.  Not to mention SAS and R.  
> 
> Statistically adept readers of Ecolog will recognize
> problems with zeros when analyzing percent data or count data
> once one has learned to write the model.  These include
> too many expected values less than zero, or other 
> problems such as zero inflated counts.   
> 
> I trust they will hold off on such problems -- in my view 
> the first and most important step for you is grasping the 
> idea of writing the model that captures your conceptualization of 
> the research question and operating hypotheses,
> instead of searching for the 'right test.'
> 
> In the fall term of 2013 a highly motivated grad student 
> with at best a tenuous grasp of algebra learned this 
> approach.  If she can learn to write the model, and 
> execute it, and interpret the result, and check the
> assumptions, then you can.
> 
> Wishing you the best,
> David S.
> http://www.mun.ca/biology/dschneider/
> 
> 
>>> On Wed, Feb 12, 2014 at 12:56 AM, Jason Hernandez <
>>> [email protected]> wrote:
>>> 
>>>> Some time ago, I inquired about ways to analyze percent cover data, and
>>>> one of the suggestions was to test for heterogeneity.  The snag, however,
>>>> is that this requires multiplying each cell value by its natural log.  My
>>>> data set has a lot of zero values, which are important to keep; but of
>>>> course there is no natural log of zero.  Is there a way to adjust the
>>>> analysis to included these zero values?  i have not managed to find
>>>> anything on this.
>>>> 
>>>> Jason Hernandez

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