Landscape genetic/genomic data analysis using R (LNDG03)

https://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-
lndg03/

This course will be delivered by Prof Rodney Dyer in Glasgow from 25th - 
29th March 2019.

Course Overview:
The term ‘landscape genetics’ has been applied studies that integrate 
ecological context and intervening landscape into population genetic 
analyses of contemporary processes such as gene flow and migration.  This 
course will cover the basics of both quantitative landscape ecology and 
population genetics, focusing on how we develop and evaluate 
spatial/genetic analyses using the R platform.

Monday 25th – Classes from 09:30 to 17:30
Module 1: Spatial & Ecological Data.
Installation & configuring R & RStudio
Acquiring spatial data, projections, and visualization
Vector and raster data

Tuesday 26th – Classes from 09:30 to 17:30
Module 2: Genetic markers and basic analyses
Genetic markers and sampling
Genetic distance, diversity, and structure
Ordination techniques based upon genetic markers

Wednesday 27th – Classes from 09:30 to 17:30
Module 3: Integrating spatial and genetic data
Barrier detection & population division
Resistance Modeling
Mantel and distance regressions
Remote sensing – LiDAR and Hyperspectral data

Thursday 28th – Classes from 09:00 to 17:00
Module 4: Integrating spatial and genetic data
Spatial autocorrelation
Network Approaches
PCMN & Redundancy

Friday 29th – Classes from 09:30 to 16:00
Module 5: Adaptive Genetic Variance
Outliers & gradients
Quantitative genetics, why we should care.
Chromosome walking

Email oliverhoo...@prstatistics.com
Check out our sister sites,
www.PRstatistics.com (Ecology and Life Sciences)
www.PRinformatics.com (Bioinformatics and data science)
www.PSstatsistics.com (Behaviour and cognition) 


1.      June 12th - 15th 2018
SPECIES DISTRIBUTION MODELLING (DBMR01)
Myuna Bay sport and recreation, Australia, Prof. Jane Elith, Dr. Gurutzeta 
Guillera
www.prstatistics.com/course/species-distribution-models-using-r-sdmr01/

2.      June 25th – 29th 2018
SPECIES DISTRIBUTION/OCCUPANCY MODELLING USING R (OCCU01)
Glasgow, Scotland, Dr. Darryl McKenzie (PROTEUS)
www.prstatistics.com/course/species-distributionoccupancy-modelling-using-r-
occu01/

3.      July 2nd - 5th 2018
SOCIAL NETWORK ANALYSIS FOR BEHAVIOURAL SCIENTISTS USING R (SNAR01)
Glasgow, Scotland, Prof. James Curley
http://www.psstatistics.com/course/social-network-analysis-for-behavioral-
scientists-snar01/

4.      July 8th – 12th 2018
MODEL BASE MULTIVARIATE ANALYSIS OF ABUNDANCE DATA USING R (MBMV02)
Glasgow, Scotland, Prof. David Warton
www.prstatistics.com/course/model-base-multivariate-analysis-of-abundance-
data-using-r-mbmv02/

5.      July 23rd – 27th 2018
EUKARYOTIC METABARCODING (EUKB01)
Glasgow, Scotland, Dr. Owen Wangensteen
http://www.prinformatics.com/course/eukaryotic-metabarcoding-eukb01/

6.      September 24th – 28th 
INTRODUCTION TO MIXED (HIERARCHICAL) MODELS FOR LIFE SCIENCES USING R 
(IMLS01) 
Glasgow, Scotland, Prof. Subhash Lele
https://www.psstatistics.com/course/introduction-to-mixed-hierarchical-
models-for-life-sciences-using-r-imls01/

7.      October 1st – 5th 
INTRODUCTION TO LINUX WORKFLOWS FOR BIOLOGISTS (IBUL03)
Glasgow, Scotland, Dr. Martin Jones
https://www.prinformatics.com/course/introduction-to-linux-workflows-for-
biologists-ibul03/

8.      October 8th – 12th 2018
INTRODUCTION TO SPATIAL ANALYSIS OF ECOLOGICAL DATA USING R (ISAE01)
Glasgow, Scotland, Prof. Subhash Lele
https://www.prstatistics.com/course/introduction-to-spatial-analysis-of-
ecological-data-using-r-isae01/

9.      October 8th – 12th 2018
INDIVIDUAL BASED MODELS USING NETLOGO AND R
Glasgow, Scotland, Dr. Andrew Jackson
Link to follow

10.     October 15th – 19th 2018
APPLIED BAYESIAN MODELLING FOR ECOLOGISTS AND EPIDEMIOLOGISTS (ABME
Glasgow, Scotland, Dr. Matt Denwood, Emma Howard
http://www.prstatistics.com/course/applied-bayesian-modelling-ecologists-
epidemiologists-abme04/

11.     October 29th – November 2nd 2018
INTRODCUTION TO R AND STATISTICS FOR BIOLOGISTS (IRFB02)
Glasgow, Scotland, Dr. Olivier Gauthier
Link to follow – see previous 
https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-
biologists-irfb01/

12.     October 29th – November 2nd 2018
INTRODUCTION TO BIOINFORMATICS FOR DNA AND RNA SEQUENCE ANALYSIS (IBDR01)
Glasgow, Scotland, Dr Malachi Griffith, Dr. Obi Griffith
www.prinformatics.com/course/precision-medicine-bioinformatics-from-raw-
genome-and-transcriptome-data-to-clinical-interpretation-pmbi01/

13.     November 5th – 8th  2018
PHYLOGENETIC COMPARATIVE METHODS FOR STUDYING DIVERSIFICATION AND 
PHENOTYPIC EVOLUTION (PCME01)
Glasgow, Scotland, Dr. Antigoni Kaliontzopoulou
https://www.prstatistics.com/course/phylogenetic-comparative-methods-for-
studying-diversification-and-phenotypic-evolution-pcme01/

14.     November 19th – 23rd  2018
STRUCTUAL EQUATION MODELLING FOR ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS 
(SEMR02)
Glasgow, Scotland, Dr. Jonathan Lefcheck
Link to follow – see previous 
https://www.prstatistics.com/course/structural-equation-modelling-for-
ecologists-and-evolutionary-biologists-semr01/

15.     November 26th – 30th 2018
FUNCTIONAL ECOLOGY FROM ORGANISM TO ECOSYSTEM: THEORY AND COMPUTATION (FEER
Glasgow, Scotland, Dr. Francesco de Bello, Dr. Lars Götzenberger, Dr. 
Carlos Carmona
http://www.prstatistics.com/course/functional-ecology-from-organism-to-
ecosystem-theory-and-computation-feer01/

16.     January 21st – 25th 2019
STATISTICAL MODELLING OF TIME-TO-EVENT DATA USING SURVIVAL ANALYSIS: AN 
INTRODUCTION FOR ANIMAL BEHAVIOURISTS, ECOLOGISTS AND EVOLUTIONARY 
BIOLOGISTS (TTED01)
Glasgow, Scotland, Dr. Will Hoppitt
https://www.psstatistics.com/course/statistical-modelling-of-time-to-event-
data-using-survival-analysis-tted01/

17.     28th January – 1st February 2019
AQUATIC ACOUSTIC TELEMETRY DATA ANALYSIS AND SURVEY DESIGN
Glasgow, Scotland, VEMCO staff and affiliates
https://www.prstatistics.com/course/aquatic-acoustic-telemetry-data-
analysis-atda01/

18.     4th – 8th February 2018
DESIGNING RELIABLE AND EFFICIENT EXPERIMENTS FOR SOCIAL SCIENCES (DRES01) 
Glasgow, Scotland, Dr. Daniel Lakens
https://www.psstatistics.com/course/designing-reliable-and-effecient-
experiments-for-social-sciences-dres01/

19.     25th February – 1st March 2019
MOVEMENT ECOLOGY (MOVE02)
Margam Discovery Centre, Wales, Dr. Luca Borger, Prof. Ronny Wilson, Dr 
Jonathan Potts
https://www.prstatistics.com/course/movement-ecology-move02/

20.     March 25th – 29th 2019
LANDSCAPE GENETIC/GENOMIC DATA ANALYSIS USING R (LNDG03)
Glasgow, Scotland, Prof. Rodney Dyer
http://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-
lndg03

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